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固相基因合成在突变文库构建中的应用:定向进化的未来?

Solid-Phase Gene Synthesis for Mutant Library Construction: The Future of Directed Evolution?

机构信息

Hubei Collaborative Innovation Center for Green Transformation of, Bio-resources, Hubei Key Laboratory of Industrial Biotechnology, College of Life Sciences, Hubei University, 368 Youyi Road, Wuchang Wuhan, 430062, China.

Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, 32 West 7th Avenue, Tianjin Airport Economic Area, Tianjin, 300308, China.

出版信息

Chembiochem. 2018 Oct 4;19(19):2023-2032. doi: 10.1002/cbic.201800339. Epub 2018 Sep 13.

Abstract

Directed evolution of stereo- and regioselective enzymes as catalysts in organic chemistry and biotechnology constitutes a complementary alternative to selective transition-metal catalysts and organocatalysts. Saturation mutagenesis at sites lining the binding pocket has emerged as a key method in this endeavor, but it suffers from amino acid bias, which reduces the quality of the library at the DNA level and, thus, at the protein level. Chemical solid-phase gene synthesis for library construction offers a solution to this fundamental problem, and the Sloning and Twist platforms are two possible options. This concept article analyzes these approaches and compares them to traditional PCR-based saturation mutagenesis; the superior commercial Twist technique shows almost no bias.

摘要

定向进化立体选择性和区域选择性酶作为有机化学和生物技术中的催化剂,是选择性过渡金属催化剂和有机催化剂的补充替代方法。在结合口袋周围的位点进行饱和突变已成为这一努力的关键方法,但它存在氨基酸偏向性,这会降低 DNA 水平和蛋白质水平文库的质量。用于文库构建的化学固相基因合成为解决这个基本问题提供了一种解决方案,Sloning 和 Twist 平台是两种可能的选择。本文分析了这些方法,并将其与传统基于 PCR 的饱和突变进行了比较;优越的商业 Twist 技术显示出几乎没有偏向性。

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