• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

手性构象中单链反式和顺式齐聚噻吩的振动分辨电子圆二色谱的计算研究。

A computational study of the vibrationally-resolved electronic circular dichroism spectra of single-chain transoid and cisoid oligothiophenes in chiral conformations.

机构信息

Department of Physical Chemistry, Faculty of Science, University of Málaga, E-29071-Málaga, Spain.

出版信息

Phys Chem Chem Phys. 2018 Aug 29;20(34):21864-21880. doi: 10.1039/c8cp03482f.

DOI:10.1039/c8cp03482f
PMID:30105334
Abstract

We simulate the vibronic profile of the electronic circular dichroism (ECD) spectra of oligothiophenes in cisoid and transoid chiral arrangements. We consider oligomers of different lengths, from two to fifteen units, and investigate extensively how the ECD spectral shapes depend on the inter-ring torsions. In general, the molecular structures we consider are not stationary points of the ground state potential energy surface. Therefore, in order to perform vibronic calculations, we present a new computational protocol able to define reduced-dimensionality models where the effect of the off-equilibrium modes is removed. This is done adopting a description of the vibrational motions in curvilinear internal coordinates, and vertical harmonic models coupled with an iterative application of projectors to define energy Hessians, and therefore effective normal modes, in the space complementary to the one of the off-equilibrium coordinates. Although we consider both Franck-Condon and Herzberg-Teller contributions, the results show that transoid twisted ribbons always give rise to monosignated ECD spectra, while bi-signated and multi-signated spectra are expected for cisoid helices. These findings are explained on the basis of the different transition strengths of the lowest electronic states imparted by the different spatial arrangement, that is almost linear for transoid structures and more globular for cisoid ones. We predicted the chiroptical response of a large number of possible molecular arrangements. These data are employed to critically discuss the experimental ECD of polythiophenes in different experimental conditions, forming either aggregates or host-guest complexes. The method here proposed to perform vibronic calculations in reduced-dimensionality models is of general applicability and its potential interest goes beyond the practical application presented here.

摘要

我们模拟了顺式和反式手性排列的寡聚噻吩的电子圆二色性(ECD)光谱的振子轮廓。我们考虑了不同长度的寡聚物,从两个到十五个单元,并广泛研究了ECD 光谱形状如何依赖于环间扭转。通常,我们考虑的分子结构不是基态势能面的稳定点。因此,为了进行振子计算,我们提出了一种新的计算方案,能够定义降维模型,其中消除了非平衡模式的影响。这是通过采用曲线内部坐标描述振动运动,并采用垂直谐波模型并结合迭代应用投影来定义能量 Hessian 来实现的,从而在非平衡坐标空间的补空间中定义有效正则模式。尽管我们考虑了 Franck-Condon 和 Herzberg-Teller 贡献,但结果表明,反式扭曲带总是产生单符号 ECD 光谱,而顺式螺旋则预期产生双符号和多符号光谱。这些发现基于不同空间排列赋予的最低电子态的不同跃迁强度来解释,即对于反式结构几乎是线性的,而对于顺式结构则更球形。我们预测了大量可能的分子排列的手性响应。这些数据用于在不同实验条件下对聚噻吩的实验 ECD 进行批判性讨论,形成聚集体或主体-客体配合物。这里提出的在降维模型中进行振子计算的方法具有普遍适用性,其潜在的兴趣超出了这里提出的实际应用。

相似文献

1
A computational study of the vibrationally-resolved electronic circular dichroism spectra of single-chain transoid and cisoid oligothiophenes in chiral conformations.手性构象中单链反式和顺式齐聚噻吩的振动分辨电子圆二色谱的计算研究。
Phys Chem Chem Phys. 2018 Aug 29;20(34):21864-21880. doi: 10.1039/c8cp03482f.
2
Vibronic Coupling Explains the Different Shape of Electronic Circular Dichroism and of Circularly Polarized Luminescence Spectra of Hexahelicenes.振动耦合解释了六螺烯的电子圆二色性和圆偏振发光光谱的不同形状。
J Chem Theory Comput. 2016 Jun 14;12(6):2799-819. doi: 10.1021/acs.jctc.6b00109. Epub 2016 May 11.
3
The role of chlorine position in the electronic circular dichroism of chlorophenyl-ethanol investigated by vibronic calculations.通过振子计算研究氯原子位置对氯代苯乙醇电子圆二色性的影响。
Chirality. 2020 Jul;32(7):932-948. doi: 10.1002/chir.23239. Epub 2020 May 23.
4
Vibrationally resolved electronic circular dichroism and circularly polarized luminescence spectra of a boron-fused double helicene: A theoretical study.硼稠合双螺旋烯的振动分辨电子圆二色性和圆偏振发光光谱:一项理论研究。
Spectrochim Acta A Mol Biomol Spectrosc. 2020 Apr 15;231:118132. doi: 10.1016/j.saa.2020.118132. Epub 2020 Feb 5.
5
Vibrationally resolved circular dichroism spectra of a molecule with isotopically engendered chirality.具有同位素诱导手性的分子的振动分辨圆二色性光谱。
Phys Chem Chem Phys. 2012 Mar 14;14(10):3669-80. doi: 10.1039/c2cp23584f. Epub 2012 Feb 8.
6
Theory for vibrationally resolved two-photon circular dichroism spectra. Application to (R)-(+)-3-methylcyclopentanone.振动分辨双光子圆二色光谱理论。应用于(R)-(+)-3-甲基环戊酮。
J Phys Chem A. 2009 Apr 23;113(16):4198-207. doi: 10.1021/jp8105925.
7
Insights for vibronic effects on spectral shapes of electronic circular dichroism and circularly polarized luminescence of aza[7]helicene.氮杂[7]螺旋烯的电子圆二色性和圆偏振发光光谱形状的振动电子效应见解。
Spectrochim Acta A Mol Biomol Spectrosc. 2020 Oct 5;239:118475. doi: 10.1016/j.saa.2020.118475. Epub 2020 May 12.
8
First Principles Studies of the Vibrationally Resolved Magnetic Circular Dichroism Spectra of Biphenylene.联苯振动分辨磁圆二色光谱的第一性原理研究
J Chem Theory Comput. 2013 Mar 12;9(3):1557-67. doi: 10.1021/ct301101h. Epub 2013 Feb 15.
9
Electronic circular dichroism in exciton-coupled dimers: vibronic spectra from a general all-coordinates quantum-dynamical approach.激子耦合二聚体中的电子圆二色性:一般全坐标量子动力学方法的振子光谱。
J Phys Chem A. 2013 Apr 25;117(16):3355-68. doi: 10.1021/jp400894v. Epub 2013 Apr 15.
10
The shape of the electronic circular dichroism spectrum of (2,6-dimethylphenyl)(phenyl)methanol: interplay between conformational equilibria and vibronic effects.(2,6-二甲基苯基)(苯基)甲醇的电子圆二色光谱形状:构象平衡与振动电子效应之间的相互作用
Phys Chem Chem Phys. 2017 Dec 13;19(48):32349-32360. doi: 10.1039/c7cp06369e.

引用本文的文献

1
Theoretical-Computational Modeling of CD Spectra of Aqueous Monosaccharides by Means of Molecular Dynamics Simulations and Perturbed Matrix Method.通过分子动力学模拟和微扰矩阵方法对水溶液中单糖的圆二色谱光谱进行理论计算建模。
Molecules. 2023 Apr 20;28(8):3591. doi: 10.3390/molecules28083591.
2
Theoretical Investigation of the Circularly Polarized Luminescence of a Chiral Boron Dipyrromethene (BODIPY) Dye.手性硼二吡咯亚甲基(BODIPY)染料圆偏振发光的理论研究
Front Chem. 2020 Sep 15;8:801. doi: 10.3389/fchem.2020.00801. eCollection 2020.