Atik Tuğba K, Atik Bülent, Kilinç Osman, Bektöre Bayhan, Duran Hülya, Selek Burak M, Ceken Nihan, Baylan Orhan, Özyurt Mustafa
Department of Microbiology, Balıkesir Atatürk City hospital, Balıkesir, Turkey. E-mail.
Saudi Med J. 2018 Aug;39(8):767-772. doi: 10.15537/smj.2018.8.22431.
To reveal the relationship between clinical and environmental isolates, analyzing both phenotypic and molecular aspects, in an Acinetobacter baumannii (A. baumannii) epidemic, and to use the epidemiological data to determine the source of the epidemic, to identify potential risk factors, and inform the effort to prevent and manage future epidemics.
Acinetobacter baumannii was isolated from 5 clinical samples in Sultan Abdulhamid Han Training and Research hospital, Istanbul, Turkey, for a week period. To determine potential sources of infection we established cultures surveillance. Microbiological identification and antibiotic susceptibility testing of A. baumannii were performed using conventional methods and automated identification system. Multiplex polymerase chain reaction (PCR) and pulsed-field gel electrophoresis (PFGE) were used for carbapenemase gene screening and clonal relationship evaluation.
Among the environmental samples, bacterial growth was observed in 3 of the sample cultures. Clinical and environmental samples collected from patients X and Y had phenotypically similar antibiotic susceptibility patterns. The clinical and environmental isolates from patients X and Y comprised the first cluster (6 isolates), the isolates from patient Z formed the second cluster (2 isolates).
We detected that all outbreak-related isolates contained the same OXA-type carbapenemase genes. Phenotypic similarity, based on the analysis of antimicrobial susceptibility patterns, was correlated with genotypic similarity. These results suggest that monitoring antimicrobial resistance patterns with daily culture surveillance follow-ups, coupled with the use of amplification based methods to detect that clonal relationships are important for the early identification of outbreaks and rapid deployment of proper countermeasures to halt the spread of the causative agent.
在鲍曼不动杆菌疫情中,从表型和分子层面分析临床分离株与环境分离株之间的关系,利用流行病学数据确定疫情源头,识别潜在风险因素,并为预防和管理未来疫情提供信息。
在土耳其伊斯坦布尔的苏丹·阿卜杜勒哈米德汗培训与研究医院,在一周时间内从5份临床样本中分离出鲍曼不动杆菌。为确定潜在感染源,我们开展了培养物监测。使用常规方法和自动鉴定系统对鲍曼不动杆菌进行微生物鉴定和抗生素敏感性测试。采用多重聚合酶链反应(PCR)和脉冲场凝胶电泳(PFGE)进行碳青霉烯酶基因筛查和克隆关系评估。
在环境样本中,3份样本培养物中观察到细菌生长。从患者X和Y采集的临床样本和环境样本在表型上具有相似的抗生素敏感性模式。来自患者X和Y的临床和环境分离株组成了第一组(6株分离株),来自患者Z的分离株形成了第二组(2株分离株)。
我们检测到所有与疫情相关的分离株都含有相同的OXA型碳青霉烯酶基因。基于抗菌药物敏感性模式分析的表型相似性与基因型相似性相关。这些结果表明,通过每日培养监测随访来监测抗菌药物耐药模式,同时使用基于扩增的方法来检测克隆关系,对于早期识别疫情和迅速采取适当对策以阻止病原体传播非常重要。