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在北太平洋亚热带环流下沉颗粒上存在多种固氮生物。

Diverse diazotrophs are present on sinking particles in the North Pacific Subtropical Gyre.

机构信息

Ocean Sciences Department, University of California at Santa Cruz, Santa Cruz, CA, USA.

Centre for Ecology and Evolution in Microbial Model Systems, Linnaeus University, Kalmar, Sweden.

出版信息

ISME J. 2019 Jan;13(1):170-182. doi: 10.1038/s41396-018-0259-x. Epub 2018 Aug 16.

Abstract

Sinking particles transport carbon and nutrients from the surface ocean into the deep sea and are considered hot spots for bacterial diversity and activity. In the oligotrophic oceans, nitrogen (N)-fixing organisms (diazotrophs) are an important source of new N but the extent to which these organisms are present and exported on sinking particles is not well known. Sinking particles were collected every 6 h over a 2-day period using net traps deployed at 150 m in the North Pacific Subtropical Gyre. The bacterial community and composition of diazotrophs associated with individual and bulk sinking particles was assessed using 16S rRNA and nifH gene amplicon sequencing. The bacterial community composition in bulk particles remained remarkably consistent throughout time and space while large variations of individually picked particles were observed. This difference suggests that unique biogeochemical conditions within individual particles may offer distinct ecological niches for specialized bacterial taxa. Compared to surrounding seawater, particle samples were enriched in different size classes of globally significant N-fixing cyanobacteria including Trichodesmium, symbionts of diatoms, and the unicellular cyanobacteria Crocosphaera and UCYN-A. The particles also contained nifH gene sequences of diverse non-cyanobacterial diazotrophs suggesting that particles could be loci for N fixation by heterotrophic bacteria. The results demonstrate that diverse diazotrophs were present on particles and that new N may thereby be directly exported from surface waters on sinking particles.

摘要

下沉颗粒将碳和营养物质从海洋表面输送到深海,被认为是细菌多样性和活性的热点。在贫营养海洋中,固氮生物(固氮菌)是新氮的重要来源,但这些生物的存在和在下沉颗粒上的输出程度尚不清楚。在北太平洋亚热带环流中,使用部署在 150 米处的网阱,每天收集两次,每次 6 小时,收集了两天的下沉颗粒。使用 16S rRNA 和 nifH 基因扩增子测序评估了与单个和整体下沉颗粒相关的固氮菌的细菌群落和组成。虽然单独挑选的颗粒的变化很大,但在整个时间和空间中,颗粒中细菌群落的组成保持着惊人的一致性。这种差异表明,单个颗粒内独特的生物地球化学条件可能为专门的细菌分类群提供独特的生态位。与周围海水相比,颗粒样品中富含不同大小类别的具有全球重要意义的固氮蓝藻,包括束毛藻、硅藻的共生体以及单细胞蓝藻 Crocosphaera 和 UCYN-A。颗粒中还含有各种非蓝藻固氮菌的 nifH 基因序列,这表明颗粒可能是异养细菌固氮的场所。结果表明,颗粒上存在多种固氮菌,新的氮可能因此直接从下沉颗粒上的表层水中输出。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/afa3/6299005/0f5a534d0d5e/41396_2018_259_Fig1_HTML.jpg

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