Clark Lindsay, Dikiy Igor, Rosenbaum Daniel M, Gardner Kevin H
Department of Biophysics, The University of Texas Southwestern Medical Center, 5323 Harry Hines Blvd., Dallas, TX, 75390-8816, USA.
Molecular Biophysics Graduate Program, The University of Texas Southwestern Medical Center, Dallas, TX, 75390, USA.
J Biomol NMR. 2018 Aug;71(4):203-211. doi: 10.1007/s10858-018-0204-3. Epub 2018 Aug 18.
NMR studies of human integral membrane proteins provide unique opportunities to probe structure and dynamics at specific locations and on multiple timescales, often with significant implications for disease mechanism and drug development. Since membrane proteins such as G protein-coupled receptors (GPCRs) are highly dynamic and regulated by ligands or other perturbations, NMR methods are potentially well suited to answer basic functional questions (such as addressing the biophysical basis of ligand efficacy) as well as guiding applications (such as novel ligand design). However, such studies on eukaryotic membrane proteins have often been limited by the inability to incorporate optimal isotopic labels for NMR methods developed for large protein/lipid complexes, including methyl TROSY. We review the different expression systems for production of isotopically labeled membrane proteins and highlight the use of the yeast Pichia pastoris to achieve perdeuteration and C methyl probe incorporation within isoleucine sidechains. We further illustrate the use of this method for labeling of several biomedically significant GPCRs.
对人类整合膜蛋白的核磁共振(NMR)研究为在特定位置和多个时间尺度上探究结构与动力学提供了独特机会,这通常对疾病机制和药物开发具有重要意义。由于诸如G蛋白偶联受体(GPCRs)等膜蛋白具有高度动态性且受配体或其他干扰因素调控,NMR方法可能非常适合回答基本功能问题(例如解决配体功效的生物物理基础)以及指导应用(例如新型配体设计)。然而,对真核膜蛋白的此类研究常常受到限制,原因在于无法为针对大型蛋白质/脂质复合物开发的NMR方法(包括甲基横向弛豫优化谱(methyl TROSY))引入最佳同位素标记。我们综述了用于生产同位素标记膜蛋白的不同表达系统,并着重介绍了利用巴斯德毕赤酵母在异亮氨酸侧链内实现全氘代和碳甲基探针掺入的方法。我们还进一步阐述了该方法在标记几种具有生物医学意义的GPCRs方面的应用。