Takahashi Daisuke, Sakane Fumio
Department of Chemistry, Graduate School of Science, Chiba University, Chiba, Japan.
PeerJ. 2018 Aug 10;6:e5449. doi: 10.7717/peerj.5449. eCollection 2018.
Diacylglycerol kinases (DGKs) are lipid kinases that modulate the levels of lipid second messengers, diacylglycerol and phosphatidic acid. Recently, increasing attention has been paid to its α isozyme (DGKα) as a potential target for cancer immunotherapy. DGKα consists of the N-terminal regulatory domains including EF-hand motifs and C1 domains, and the C-terminal catalytic domain (DGKα-CD). To date, however, no structures of mammalian DGKs including their CDs have yet been reported, impeding our understanding on the catalytic mechanism of DGKs and the rational structure-based drug design. Here we attempted to produce DGKα-CD or a full-length DGKα using bacterial and baculovirus-insect cell expression system for structural studies. While several DGKα-CD constructs produced using both bacterial and insect cells formed insoluble or soluble aggregates, the full-length DGKα expressed in insect cells remained soluble and was purified to near homogeneity as a monomer with yields (1.3 mg/mL per one L cell culture) feasible for protein crystallization. Following enzymatic characterization showed that the purified DGKα is in fully functional state. We further demonstrated that the purified enzyme could be concentrated without any significant aggregation, and characterized its secondary structure by circular dichroism. Taken together, these results suggest that the presence of N-terminal regulatory domains suppress protein aggregation likely via their intramolecular interactions with DGKα-CD, and demonstrate that the baculovirus-insect cell expression of the full-length form of DGKα, not DGKα-CD alone, represents a promising approach to produce protein sample for structural studies of DGKα. Thus, our study will encourage future efforts to determine the crystal structure of DGK, which has not been determined since it was first identified in 1959.
二酰基甘油激酶(DGKs)是一类脂质激酶,可调节脂质第二信使二酰基甘油和磷脂酸的水平。最近,人们越来越关注其α同工酶(DGKα)作为癌症免疫治疗的潜在靶点。DGKα由包括EF手基序和C1结构域的N端调节结构域以及C端催化结构域(DGKα-CD)组成。然而,迄今为止,尚未报道包括其催化结构域在内的哺乳动物DGKs的结构,这阻碍了我们对DGKs催化机制的理解以及基于结构的合理药物设计。在这里,我们尝试使用细菌和杆状病毒-昆虫细胞表达系统来生产DGKα-CD或全长DGKα,用于结构研究。虽然使用细菌和昆虫细胞产生的几种DGKα-CD构建体形成了不溶性或可溶性聚集体,但在昆虫细胞中表达的全长DGKα仍保持可溶,并作为单体纯化至接近均一,产量(每升细胞培养物1.3 mg/mL)对于蛋白质结晶是可行的。后续的酶学表征表明纯化的DGKα处于完全功能状态。我们进一步证明纯化的酶可以浓缩而无任何明显聚集,并通过圆二色性表征其二级结构。综上所述,这些结果表明N端调节结构域的存在可能通过其与DGKα-CD的分子内相互作用抑制蛋白质聚集,并证明全长形式的DGKα而非单独的DGKα-CD的杆状病毒-昆虫细胞表达是一种为DGKα结构研究生产蛋白质样品的有前景的方法。因此,我们的研究将鼓励未来努力确定DGK的晶体结构,自1959年首次鉴定以来,该结构尚未确定。