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DNA上致癌物结合位点的高分辨率图谱绘制。

High-resolution mapping of carcinogen binding sites on DNA.

作者信息

Boles T C, Hogan M E

出版信息

Biochemistry. 1986 May 20;25(10):3039-43. doi: 10.1021/bi00358a045.

DOI:10.1021/bi00358a045
PMID:3013290
Abstract

We have used a photochemical method to map covalent binding sites of the carcinogen benzo[a]pyrenediol epoxide (BPDE) within DNA from the transcriptional control region of the chicken adult beta-globin gene. Our preliminary low-resolution mapping has demonstrated that this region contains highly preferred BPDE binding sites [Boles, T.C., & Hogan, M.E. (1984) Proc. Natl. Acad. Sci. U.S.A. 81, 5623-5627]. Here, we find that BPDE binding at individual G residues in this region is influenced by nearest-neighbor interactions and also by longer range interactions that may be attributable to sequence-specific variation of DNA secondary structure. Our findings suggest that long poly(dG) sequences should be preferred sites for BPDE action in other genes.

摘要

我们采用了一种光化学方法来绘制致癌物苯并[a]芘二醇环氧化物(BPDE)在鸡成年β-珠蛋白基因转录控制区域的DNA内的共价结合位点。我们初步的低分辨率图谱表明,该区域包含高度优先的BPDE结合位点[博尔斯,T.C.,& 霍根,M.E.(1984年)美国国家科学院院刊81,5623 - 5627]。在此,我们发现该区域单个G残基处的BPDE结合受到最近邻相互作用以及可能归因于DNA二级结构序列特异性变化的更远距离相互作用的影响。我们的研究结果表明,长的聚(dG)序列应该是其他基因中BPDE作用的优先位点。

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用于确定DNA-小分子相互作用序列选择性的光亲和方法:放线菌素D和溴化乙锭。
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