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双铁细胞色素 c:结构-功能关系及血红素-血红素相互作用的影响。

Diheme Cytochrome c: Structure-Function Correlation and Effect of Heme-Heme Interactions.

机构信息

Department of Chemistry , Indian Institute of Technology Kanpur , Kanpur - 208016 , India.

Department of Physics, School for Physical and Decision Sciences , Babasaheb Bhimrao Ambedkar University , Lucknow - 226025 , India.

出版信息

Inorg Chem. 2018 Sep 17;57(18):11498-11510. doi: 10.1021/acs.inorgchem.8b01368. Epub 2018 Aug 27.

Abstract

We explore here the structure-function relationship of the diheme cytochrome c using synthetic diheme analogs which serve as a convenient tool to investigate various aspects of Nature's sophisticated design in vitro. A large series of diiron ethane-bridged porphyrin dimers, both in the oxidized and the reduced states, are synthesized and their structural, chemical, and electrochemical properties have been scrutinized. Interestingly, the iron-to-iron nonbonding separation observed in such dihemes ranges from 9.49 to 10.06 Å which is very similar to the separation of 9.4 and 9.9 Å observed in the crystal structures of diheme cytochromes c isolated from Geobacter sulfurreducens and Haemophilus influenza, respectively. The Fe/Fe redox couple in the diheme complex is shifted toward more positive than their monomeric analog. Present study unmasks the electronic structure and properties of diheme centers and also highlights the significance of their structural arrangement and axial ligand orientation, and heme-to-heme separation. The Atoms in Molecules (AIM) analysis suggests long-range attractive dispersion forces between the heme units for the observed structure and properties in dihemes.

摘要

我们在这里探索二血红素细胞色素 c 的结构-功能关系,使用合成的二血红素类似物作为体外研究自然界复杂设计的各个方面的便捷工具。合成了一系列氧化态和还原态的双铁乙烷桥联卟啉二聚体,并对其结构、化学和电化学性质进行了仔细研究。有趣的是,在这些二血红素中观察到的铁-铁非键合分离范围从 9.49 到 10.06 Å,与从 Geobacter sulfurreducens 和 Haemophilus influenza 中分离出的二血红素细胞色素 c 的晶体结构中观察到的 9.4 和 9.9 Å 的分离非常相似。二血红素配合物中的 Fe/Fe 氧化还原对向更正的方向移动,比其单体类似物更正。本研究揭示了二血红素中心的电子结构和性质,并强调了其结构排列和轴向配体取向以及血红素-血红素分离的重要性。分子中的原子 (AIM) 分析表明,在二血红素中观察到的结构和性质之间存在着血红素单元之间的长程吸引色散力。

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