Yamada Yasutaka, Sugawara Sho, Arai Takayuki, Kojima Satoko, Kato Mayuko, Okato Atsushi, Yamazaki Kazuto, Naya Yukio, Ichikawa Tomohiko, Seki Naohiko
Department of Functional Genomics, Chiba University Graduate School of Medicine, Chiba, Japan.
Department of Urology, Chiba University Graduate School of Medicine, Chiba, Japan.
Int J Urol. 2018 Nov;25(11):953-965. doi: 10.1111/iju.13783. Epub 2018 Aug 28.
To identify key oncogenes and proteins that are controlled by the microRNA miR-29 family (miR-29a, miR-29b and miR-29c) in renal cell carcinoma pathogenesis.
Genome-wide gene expression and in silico database analyses were carried out. The Cancer Genome Atlas database was used to investigate the clinical significance of gene expression data in renal cell carcinoma patients. Loss-of-function assays were applied to investigate the function of target genes.
We identified 47 possible target genes that might be regulated by the miR-29 family in renal cell carcinoma cells. Among the targets of the miR-29 family, high expression of 10 genes (ADAMTS14, TRIB13, SERPINH1, FCGR1B, COL1A1, LAIR2, WISP2, TREM1, TNKS1BP1 and GBP2) significantly predicted poor patient prognosis (P < 0.001). SERPINH1 was directly regulated by the miR-29 family, and its overexpression was detected in renal cell carcinoma surgical specimens and tyrosine kinase inhibitor failure autopsy specimens. High expression of SERPINH1 was significantly associated with tumor stage, pathological grade and poor prognosis (P < 0.0001). Knockdown assays showed that its expression enhanced cancer cell migration and invasive abilities.
Genes regulated by the anti-tumor miR-29 family are closely involved in the molecular pathogenesis of renal cell carcinoma. Our approach based on anti-tumor microRNAs might contribute to the development of new diagnostic markers and therapeutic strategies.
确定在肾细胞癌发病机制中受微小RNA miR-29家族(miR-29a、miR-29b和miR-29c)调控的关键癌基因和蛋白质。
进行全基因组基因表达和计算机数据库分析。利用癌症基因组图谱数据库研究肾细胞癌患者基因表达数据的临床意义。采用功能丧失分析来研究靶基因的功能。
我们在肾癌细胞中鉴定出47个可能受miR-29家族调控的潜在靶基因。在miR-29家族的靶标中,10个基因(ADAMTS14、TRIB13、SERPINH1、FCGR1B、COL1A1、LAIR2、WISP2、TREM1、TNKS1BP1和GBP2)的高表达显著预示患者预后不良(P < 0.001)。SERPINH1受miR-29家族直接调控,在肾细胞癌手术标本和酪氨酸激酶抑制剂治疗失败的尸检标本中检测到其过表达。SERPINH1的高表达与肿瘤分期、病理分级及预后不良显著相关(P < 0.0001)。敲低实验表明其表达增强了癌细胞的迁移和侵袭能力。
受抗肿瘤miR-29家族调控的基因密切参与肾细胞癌的分子发病机制。我们基于抗肿瘤微小RNA的方法可能有助于开发新的诊断标志物和治疗策略。