College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, Heilongjiang, China.
Department of Neurology, The First Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang, China.
Cancer Res. 2018 Dec 1;78(23):6575-6580. doi: 10.1158/0008-5472.CAN-18-0689. Epub 2018 Aug 28.
: Systematically tracking the tumor immunophenotype is required to understand the mechanisms of cancer immunity and improve clinical benefit of cancer immunotherapy. However, progress in current research is hindered by the lack of comprehensive immune activity resources and easy-to-use tools for biologists, clinicians, and researchers to conveniently evaluate immune activity during the "cancer-immunity cycle." We developed a user-friendly one-stop shop web tool called TIP to comprehensively resolve tumor immunophenotype. TIP has the capability to rapidly analyze and intuitively visualize the activity of anticancer immunity and the extent of tumor-infiltrating immune cells across the seven-step cancer-immunity cycle. Also, we precalculated the pan-cancer immunophenotype for 11,373 samples from 33 The Cancer Genome Atlas human cancers that allow users to obtain and compare immunophenotype of pan-cancer samples. We expect TIP to be useful in a large number of emerging cancer immunity studies and development of effective immunotherapy biomarkers. TIP is freely available for use at http://biocc.hrbmu.edu.cn/TIP/. SIGNIFICANCE: TIP is a one-stop shop platform that can help biologists, clinicians, and researchers conveniently evaluate anticancer immune activity with their own gene expression data..
: 系统地跟踪肿瘤免疫表型对于理解癌症免疫机制和提高癌症免疫治疗的临床获益至关重要。然而,当前研究的进展受到缺乏全面的免疫活性资源以及易于生物学家、临床医生和研究人员使用的工具的阻碍,这些工具可用于在“癌症-免疫循环”期间方便地评估免疫活性。我们开发了一个用户友好的一站式网络工具,称为 TIP,用于全面解析肿瘤免疫表型。TIP 能够快速分析和直观地可视化抗癌免疫活性以及肿瘤浸润免疫细胞的程度,跨越癌症免疫周期的七个步骤。此外,我们还预先计算了来自 33 个癌症基因组图谱人类癌症的 11373 个样本的泛癌症免疫表型,允许用户获取和比较泛癌症样本的免疫表型。我们期望 TIP 在大量新兴的癌症免疫研究和有效免疫治疗生物标志物的开发中发挥作用。TIP 可免费在 http://biocc.hrbmu.edu.cn/TIP/ 使用。
TIP 是一个一站式平台,可帮助生物学家、临床医生和研究人员方便地使用自己的基因表达数据评估抗癌免疫活性。