结构特异性 DNA 复制叉识别指导 PriA 解旋酶的解旋酶和复制重启动活性。
Structure-specific DNA replication-fork recognition directs helicase and replication restart activities of the PriA helicase.
机构信息
Department of Biomolecular Chemistry, University of Wisconsin School of Medicine and Public Health, Madison, WI 53706.
Department of Microbiology, University of Massachusetts Amherst, Amherst, MA 01003.
出版信息
Proc Natl Acad Sci U S A. 2018 Sep 25;115(39):E9075-E9084. doi: 10.1073/pnas.1809842115. Epub 2018 Sep 10.
DNA replication restart, the essential process that reinitiates prematurely terminated genome replication reactions, relies on exquisitely specific recognition of abandoned DNA replication-fork structures. The PriA DNA helicase mediates this process in bacteria through mechanisms that remain poorly defined. We report the crystal structure of a PriA/replication-fork complex, which resolves leading-strand duplex DNA bound to the protein. Interaction with PriA unpairs one end of the DNA and sequesters the 3'-most nucleotide from the nascent leading strand into a conserved protein pocket. Cross-linking studies reveal a surface on the winged-helix domain of PriA that binds to parental duplex DNA. Deleting the winged-helix domain alters PriA's structure-specific DNA unwinding properties and impairs its activity in vivo. Our observations lead to a model in which coordinated parental-, leading-, and lagging-strand DNA binding provide PriA with the structural specificity needed to act on abandoned DNA replication forks.
DNA 复制重启动是一个关键的过程,它重新启动过早终止的基因组复制反应,依赖于对废弃的 DNA 复制叉结构的高度特异性识别。PriA DNA 解旋酶通过仍然定义不明确的机制在细菌中介导这个过程。我们报告了 PriA/复制叉复合物的晶体结构,该结构解析了与蛋白质结合的领头链双链 DNA。与 PriA 的相互作用使 DNA 的一端解配对,并将 3'-最核苷酸从新生的领头链隔离到保守的蛋白质口袋中。交联研究揭示了 PriA 的翼型螺旋结构域上与亲本双链 DNA 结合的一个表面。删除翼型螺旋结构域会改变 PriA 的结构特异性 DNA 解旋特性,并损害其在体内的活性。我们的观察结果提出了一个模型,即协调的亲本链、领头链和滞后链 DNA 结合为 PriA 提供了在废弃的 DNA 复制叉上发挥作用所需的结构特异性。
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