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I 型戊二酸血症的分子遗传学研究:一种新突变的鉴定。

Molecular genetic study of glutaric aciduria, type I: Identification of a novel mutation.

机构信息

Department of Molecular Genetics, Marvdasht Branch, Islamic Azad University, Marvdasht, Iran.

Department of Molecular Genetics, Science and Research Branch, Islamic Azad University, Fars, Iran.

出版信息

J Cell Biochem. 2019 Mar;120(3):3367-3372. doi: 10.1002/jcb.27607. Epub 2018 Sep 11.

DOI:10.1002/jcb.27607
PMID:30203563
Abstract

Glutaric acidemia type I (GA-1) is an inborn error of metabolism due to deficiency of glutaryl-CoA dehydrogenase (GCDH), which catalyzes the conversion of glutaryl-CoA to crotonyl-CoA. GA-1 occurs in about 1 in 100 000 infants worldwide. The GCDH gene is on human chromosome 19p13.2, spans about 7 kb and comprises 11 exons and 10 introns. Tandem mass spectrometry (MS/MS) was used for clinical diagnosis in a proband from Iran with GA-1. Sanger sequencing was performed using primers specific for coding exons and exon-intron flanking regions of the GCDH gene in the proband. Cosegregation analysis and in silico assessment were performed to confirm the pathogenicity of the candidate variant. A novel homozygous missense variant c.1147C > A (p.Arg383Ser) in exon 11 of GCDH was identified. Examination of variant through in silico software tools determines its deleterious effect on protein in terms of function and stability. The variant cosegregates with the disease in family. In this study, the clinical and molecular aspects of GA-1 were investigated, which showed one novel mutation in the GCDH gene in an Iranian patient. The variant is categorized as pathogenic according to the the guideline of the American College of Medical Genetics and Genomics (ACMG) for variant interpretation. This mutation c.1147C > A (p.Arg383Ser) may also be prevalent among Iranian populations.

摘要

I 型戊二酸血症(GA-1)是一种由于谷氨酸酰辅酶 A 脱氢酶(GCDH)缺乏导致的先天性代谢缺陷病,该酶可催化谷氨酸酰辅酶 A 转化为丁烯酰辅酶 A。GA-1 于全世界约每 10 万名婴儿中出现 1 例。GCDH 基因位于人类 19p13.2 染色体上,跨度约 7kb,由 11 个外显子和 10 个内含子组成。串联质谱(MS/MS)用于伊朗一名 GA-1 先证者的临床诊断。采用针对 GCDH 基因外显子和外显子-内含子侧翼区域的特异性引物对先证者进行 Sanger 测序。进行连锁分析和计算机预测评估以确认候选变异的致病性。在 GCDH 第 11 外显子中发现了一个新的纯合错义变异 c.1147C > A(p.Arg383Ser)。通过计算机软件工具对变异进行检查,确定其在功能和稳定性方面对蛋白质的有害影响。该变异与家族中的疾病共分离。本研究对 GA-1 的临床和分子方面进行了研究,结果在一名伊朗患者的 GCDH 基因中发现了一个新的突变。根据美国医学遗传学与基因组学学院(ACMG)的变异解读指南,该变异被归类为致病性。这种突变 c.1147C > A(p.Arg383Ser)可能在伊朗人群中也很常见。

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引用本文的文献

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Two novel compound heterozygous variants of the GCDH gene in two Chinese families with glutaric acidaemia type I identified by high-throughput sequencing and a literature review.通过高通量测序和文献综述在两个中国I型戊二酸血症家系中鉴定出GCDH基因的两个新型复合杂合变异体。
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2
A novel mutation in the glutaryl-CoA dehydrogenase gene (GCDH) in an Iranian patient affected with Glutaric acidemia type 1.一名患有1型戊二酸血症的伊朗患者的戊二酰辅酶A脱氢酶基因(GCDH)发生了一种新的突变。
Clin Case Rep. 2021 Sep 7;9(9):e04749. doi: 10.1002/ccr3.4749. eCollection 2021 Sep.
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