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NadA作为潜在疫苗候选物的同源建模与表位预测

Homology Modeling and Epitope Prediction of NadA as a Potential Vaccine Candidate in .

作者信息

Shahsavani Narjes, Sheikhha Mohammad Hasan, Yousefi Hassan, Sefid Fatemeh

机构信息

Shahid Sadoughi University of Medical Sciences and Health Services, Yazd, Iran.

Department of Medical Genetics, School of Medicine, Tehran University of Medical Sciences, Tehran, Iran.

出版信息

Int J Mol Cell Med. 2018 Winter;7(1):53-68. doi: 10.22088/IJMCM.BUMS.7.1.53. Epub 2018 Feb 10.

Abstract

is a facultative pathogen bacterium which is well founded with a number of adhesion molecules to facilitate its colonization in human nasopharynx track. is a major cause of mortality from severe meningococcal disease and septicemia. adhesion, NadA, is a trimeric autotransporter adhesion molecule which is involved in cell adhesion, invasion, and antibody induction. It is identified in approximately 50% of isolates, and is established as a vaccine candidate due to its antigenic effects. In the present study, we exploited bioinformatics tools to better understand and determine the 3D structure of NadA and its functional residues to select B cell epitopes, and provide information for elucidating the biological function and vaccine efficacy of NadA. Therefore, this study provided essential data to close gaps existing in biological areas. The most appropriate model of NadA was designed by SWISS MODEL software and important residues were determined using the subsequent epitope mapping procedures. Locations of important linear and conformational epitopes were determined and conserved residues were identified to broaden our knowledge of efficient vaccine design to reduce meningococcal infectioun in population. These data now provide a theme to design more broadly cross-protective antigens.

摘要

是一种兼性病原菌,它有多种粘附分子,有助于其在人类鼻咽部定植。是严重脑膜炎球菌病和败血症致死的主要原因。其粘附分子NadA是一种三聚体自转运粘附分子,参与细胞粘附、侵袭和抗体诱导。在大约50%的分离株中可鉴定到它,由于其抗原效应,它被确立为一种候选疫苗。在本研究中,我们利用生物信息学工具更好地理解和确定NadA的三维结构及其功能残基,以选择B细胞表位,并为阐明NadA的生物学功能和疫苗效力提供信息。因此,本研究提供了重要数据,以填补生物学领域存在的空白。通过SWISS MODEL软件设计了最合适的NadA模型,并使用后续的表位作图程序确定了重要残基。确定了重要线性和构象表位的位置,并鉴定了保守残基,以拓宽我们对有效疫苗设计的认识,从而减少人群中的脑膜炎球菌感染。这些数据现在为设计更具广泛交叉保护性的抗原提供了一个思路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2741/6134420/884ad82b8196/ijmcm-7-053-g001.jpg

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