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海水中胞外黄素的分布及其与氧化还原梯度和微生物群落成员的关系。

Distribution of Extracellular Flavins in a Coastal Marine Basin and Their Relationship to Redox Gradients and Microbial Community Members.

机构信息

Department of Earth Sciences , University of Southern California , Los Angeles , California United States.

Department of Oceanography , Texas A&M University , College Station , Texas United States.

出版信息

Environ Sci Technol. 2018 Nov 6;52(21):12265-12274. doi: 10.1021/acs.est.8b02822. Epub 2018 Oct 15.

DOI:10.1021/acs.est.8b02822
PMID:30257556
Abstract

The flavins (including flavin mononucleotide (FMN) and riboflavin (RF)) are a class of organic compounds synthesized by organisms to assist in critical redox reactions. While known to be secreted extracellularly by some species in laboratory-based cultures, flavin concentrations are largely unreported in the natural environment. Here, we present pore water and water column profiles of extracellular flavins (FMN and RF) and two degradation products (lumiflavin and lumichrome) from a coastal marine basin in the Southern California Bight alongside ancillary geochemical and 16S rRNA microbial community data. Flavins were detectable at picomolar concentrations in the water column (93-300 pM FMN, 14-40 pM RF) and low nanomolar concentrations in pore waters (250-2070 pM FMN, 11-210 pM RF). Elevated pore water flavin concentrations displayed an increasing trend with sediment depth and were significantly correlated with the total dissolved Fe (negative) and Mn (positive) concentrations. Network analysis revealed a positive relationship between flavins and the relative abundance of Dehalococcoidia and the MSBL9 clade of Planctomycetes, indicating possible secretion by members of these lineages. These results suggest that flavins are a common component of the so-called shared extracellular metabolite pool, especially in anoxic marine sediments where they exist at physiologically relevant concentrations for metal oxide reduction.

摘要

黄素(包括黄素单核苷酸(FMN)和核黄素(RF))是一类由生物体合成的有机化合物,有助于关键的氧化还原反应。虽然已知某些物种在实验室培养中会分泌到细胞外,但黄素在自然环境中的浓度在很大程度上没有被报道。在这里,我们展示了南加州湾沿海海洋盆地的胞外黄素(FMN 和 RF)和两种降解产物(光黄素和光色霉素)的孔隙水和水柱剖面,以及辅助地球化学和 16S rRNA 微生物群落数据。在水柱中可以检测到皮摩尔浓度的黄素(93-300 pM FMN,14-40 pM RF)和低纳摩尔浓度的胞外水(250-2070 pM FMN,11-210 pM RF)。升高的胞外水黄素浓度随沉积物深度呈上升趋势,并与总溶解铁(负)和锰(正)浓度呈显著正相关。网络分析显示,黄素与 Dehalococcoidia 的相对丰度和浮霉菌门的 MSBL9 分支之间呈正相关,表明这些谱系的成员可能会分泌黄素。这些结果表明,黄素是所谓的共享细胞外代谢物池的常见成分,特别是在缺氧的海洋沉积物中,它们以生理相关的浓度存在,有利于金属氧化物还原。

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