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全基因组鉴定胎盘内的增强子元件。

Genome-wide identification of enhancer elements in the placenta.

机构信息

Department of Genetics, Development and Cell Biology, Iowa State University, Ames, IA, 50011-1079, USA; Interdepartmental Genetics and Genomics, Iowa State University, Ames, IA, 50011-1079, USA.

Department of Genetics, Development and Cell Biology, Iowa State University, Ames, IA, 50011-1079, USA; Bioinformatics and Computational Biology, Iowa State University, Ames, IA, 50011-1079, USA.

出版信息

Placenta. 2019 Apr;79:72-77. doi: 10.1016/j.placenta.2018.09.003. Epub 2018 Sep 15.

Abstract

Normal placental development is essential for a healthy pregnancy, and is contingent upon tight spatiotemporal regulation of gene expression. One level of transcriptional control is via enhancer elements in the genome. Enhancers are distal cis-regulatory elements that can impact gene expression regardless of their position or orientation. The study of enhancers in the placenta is usually focused on one or two at a time, and the simultaneous identification of all enhancers has been limited. However, such a holistic approach is necessary if we are to gain a systems-level understanding of gene expression regulation in the placenta. Here, we review current methods for genome-scale enhancer identification, as well as studies that have applied those techniques in the placenta, with the aim of guiding future research.

摘要

正常的胎盘发育对于健康妊娠至关重要,并且取决于基因表达的紧密时空调节。转录控制的一个层次是通过基因组中的增强子元件。增强子是远距离顺式调控元件,无论其位置或方向如何,都可以影响基因表达。胎盘增强子的研究通常集中在一次一个或两个,同时识别所有增强子一直受到限制。然而,如果我们要获得对胎盘基因表达调控的系统水平的理解,就需要采用这种整体方法。在这里,我们回顾了用于全基因组范围增强子鉴定的当前方法,以及在胎盘应用这些技术的研究,旨在为未来的研究提供指导。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/33e0/6420402/e465e02e1f0b/nihms-1508217-f0001.jpg

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