Chemistry Faculty, Autonomous University of Yucatan, 97069 Mérida, Yucatán, Mexico.
Molecules. 2018 Sep 30;23(10):2505. doi: 10.3390/molecules23102505.
Mechanistic theoretical studies about the feasibility of the traditional proposed mechanism of formation for icetexane diterpene dimer grandione were assessed using density functional method at the M06-2X/6-31G(d,p) level of theory. Bulk water solvent effects were taken into account implicitly using the polarizable continuum model (SCI-PCM). The results were compared with the selectivity found in the biomimetic synthesis performed by experimental research groups. The relative free energy calculation shows that the one-step H-DA formation mechanism nominated in the literature is not a viable mechanism. We found that an alternative competing Tandem pathway is consistent with the experimental trends. Thus, our results suggested that the compound grandione is formed via a H-DA/retro-Claisen rearrangement and not by the traditional H-DA mechanism proposed early in the experimental studies. The H-DA initial step produce a biecyclic adduct followed by a domino retro-Claisen rearrangement that releases the energy strain of the bicyclic intermediary. Steric issues and hyperconjugation interactions are the mainly factors driving the reaction nature and the selectivity in the formation reaction. Finally, the enzymatic assistance for dimer formation was analyzed in terms of the calculated transition state energy barrier.
采用密度泛函理论(M06-2X/6-31G(d,p))方法,对传统提出的 icetexane 二萜二聚体 grandione 形成机制的可行性进行了理论研究。采用极化连续模型(SCI-PCM)隐式考虑了体相水溶剂效应。将结果与实验研究小组进行的仿生合成中发现的选择性进行了比较。相对自由能计算表明,文献中提名的一步 H-DA 形成机制不是可行的机制。我们发现,一种替代的竞争串联途径与实验趋势一致。因此,我们的结果表明,化合物 grandione 是通过 H-DA/retro-Claisen 重排形成的,而不是通过早期实验研究中提出的传统 H-DA 机制形成的。H-DA 的初始步骤产生双环加合物,然后发生多米诺 retro-Claisen 重排,释放双环中间体的能量应变。立体问题和超共轭相互作用是驱动反应性质和形成反应选择性的主要因素。最后,根据计算的过渡态能垒,分析了酶辅助二聚体形成的情况。