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在四种轮虫 Brachionus 物种中,全基因组鉴定了整个 90 个谷胱甘肽 S-转移酶(GST)亚家族基因,并对内分泌干扰化学物质的转录调控进行了研究。

Genome-wide identification of the entire 90 glutathione S-transferase (GST) subfamily genes in four rotifer Brachionus species and transcriptional modulation in response to endocrine disrupting chemicals.

机构信息

Department of Biological Science, College of Science, Sungkyunkwan University, Suwon 16419, South Korea.

Graduate School of Fisheries and Environmental Sciences, Nagasaki University, Nagasaki 852-8521, Japan.

出版信息

Comp Biochem Physiol Part D Genomics Proteomics. 2018 Dec;28:183-195. doi: 10.1016/j.cbd.2018.09.003. Epub 2018 Sep 26.

Abstract

Genome-wide identification of glutathione S-transferase (GST), a major phase II detoxification enzyme, was investigated in four different aquatic model rotifer species Brachionus koreanus, B. plicatilis, B. rotundiformis, and B. calyciflorus. GSTs are ubiquitous antioxidant enzymes that play versatile function including cellular detoxification, stress alleviation, and production of the radical conjugates. Among the four rotifers, B. rotundiformis was found with the least number of GST genes (total 19 GST genes), whereas the other three species shared 23 to 24 GST genes. Among the identified GST genes, belonging to the cytosolic GST superfamily, the expansion of GST sigma classes mainly occurs through tandem duplication, resulting in tandem-arrayed gene clusters on the chromosomes. Overall, the number of genes discovered in this study was highest in the sigma class, zeta, alpha, and omega in descending order. With integration of phylogenetic analysis and xenobiotic-mediated GST mRNA expression patterns along with previous enzymatic activities, the functional divergence among species-specific GST genes was clearly observed. This study covers full identification of GST classes in three marine rotifer and one fresh-water rotifer species and their important role in marine environmental ecotoxicology.

摘要

本研究对 4 种不同的水生模式轮虫(Brachionus koreanus、B. plicatilis、B. rotundiformis 和 B. calyciflorus)中的谷胱甘肽 S-转移酶(GST),一种主要的 II 相解毒酶,进行了全基因组鉴定。GST 是普遍存在的抗氧化酶,具有多种功能,包括细胞解毒、减轻压力和产生自由基共轭物。在这 4 种轮虫中,B. rotundiformis 被发现拥有最少数量的 GST 基因(总共 19 个 GST 基因),而其他 3 个物种则共享 23 到 24 个 GST 基因。在所鉴定的 GST 基因中,属于细胞溶质 GST 超家族,GST sigma 类的扩展主要通过串联重复发生,导致染色体上串联排列的基因簇。总的来说,在本研究中发现的基因数量以 sigma 类最多,zeta、alpha 和 omega 类依次减少。通过整合系统发育分析和外源性 GST mRNA 表达模式以及先前的酶活性,明显观察到种特异性 GST 基因之间的功能分化。本研究涵盖了三种海洋轮虫和一种淡水轮虫物种中 GST 类的全面鉴定,以及它们在海洋环境生态毒理学中的重要作用。

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