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甘草酸存在下的脂双层中的分子间空隙。

Intermolecular Voids in Lipid Bilayers in the Presence of Glycyrrhizic Acid.

机构信息

Novosibirsk State University , Novosibirsk 63090 , Russia.

Voevodsky Institute of Chemical Kinetics and Combustion , Novosibirsk 63090 , Russia.

出版信息

J Phys Chem B. 2018 Nov 1;122(43):9938-9946. doi: 10.1021/acs.jpcb.8b07989. Epub 2018 Oct 17.

Abstract

It is known that glycyrrhizic acid (GA) promotes the enhancement of the activity of several medicines. This is attributed to the fact that GA increases the membrane permeability of small drug molecules. There is an opinion that GA facilitates the formation of additional large voids in the membrane, which enhance the passive diffusion of molecules across the membrane. In this work, we investigate how GA influences the intermolecular voids using the molecular dynamics simulation. We calculate the interstitial spheres (empty spheres inscribed between molecules) in model DPPC and DOPC bilayers, both pure and with the addition of cholesterol. It was observed that the addition of GA does not lead to the formation of new large interstitial spheres; i.e., new large voids do not appear. The distribution of empty volume inside the bilayers is also studied. We calculated the profiles of the empty volume fraction both from the middle plane of the bilayer and from its outer surface (from the lipid-water interface). This analysis has shown that the addition of GA does not cause the increase of the empty volume in the bilayer; moreover, there is a slight decrease in the bilayers with cholesterol. Thus, we have not found a confirmation of the simplest hypothesis that individual GA molecules induce pores in the membrane.

摘要

已知甘草酸(GA)能促进几种药物活性的增强。这归因于 GA 增加了小分子药物的膜透过性。有一种观点认为,GA 有助于在膜中形成额外的大空隙,从而增强分子跨膜的被动扩散。在这项工作中,我们使用分子动力学模拟研究了 GA 如何影响分子间的空隙。我们计算了模型 DPPC 和 DOPC 双层中纯双层和添加胆固醇的双层的间隙球(分子之间的空球)。观察到添加 GA 不会导致新的大间隙球的形成;也就是说,不会出现新的大空隙。还研究了双层内空体积的分布。我们从双层的中间平面和外层(从脂质-水界面)计算了空体积分数的分布。该分析表明,添加 GA 不会导致双层中空体积的增加;此外,含有胆固醇的双层略有减少。因此,我们没有找到最简单假设的证据,即单个 GA 分子在膜中诱导孔。

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