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利用尿嘧啶营养缺陷型宿主和人工合成核苷筛选宏基因组文库中的水解酶。

Application of the uridine auxotrophic host and synthetic nucleosides for a rapid selection of hydrolases from metagenomic libraries.

机构信息

Department of Molecular Microbiology and Biotechnology, Institute of Biochemistry, Life Sciences Center, Vilnius University, Sauletekio 7, Vilnius, LT-10257, Lithuania.

出版信息

Microb Biotechnol. 2019 Jan;12(1):148-160. doi: 10.1111/1751-7915.13316. Epub 2018 Oct 9.

Abstract

A high-throughput method (≥ 10 of clones can be analysed on a single agar plate) for the selection of ester-hydrolysing enzymes was developed based on the uridine auxotrophy of Escherichia coli strain DH10B ΔpyrFEC and the acylated derivatives 2',3',5'-O-tri-acetyluridine and 2',3',5'-O-tri-hexanoyluridine as the sole source of uridine. The proposed approach permits the selection of hydrolases belonging to different families and active towards different substrates. Moreover, the ester group of the substrate used for the selection, at least partly, determined the specificity of the selected enzymes.

摘要

基于大肠杆菌菌株 DH10B ΔpyrFEC 的尿嘧啶营养缺陷型和酰化衍生物 2',3',5'-O-三乙酰尿苷和 2',3',5'-O-三己酰尿苷作为唯一尿嘧啶源,开发了一种用于选择酯水解酶的高通量方法(单个琼脂平板上可分析≥ 10 个克隆)。该方法允许选择属于不同家族且对不同底物具有活性的水解酶。此外,用于选择的底物的酯基团至少部分决定了所选酶的特异性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6aee/6302743/d08da83bc0e8/MBT2-12-148-g001.jpg

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