Department of Chemistry and Biochemistry, University of Wisconsin-La Crosse, 1725 State Street, La Crosse, WI 54601, United States.
Department of Chemistry and Biochemistry, University of Wisconsin-La Crosse, 1725 State Street, La Crosse, WI 54601, United States.
J Struct Biol. 2018 Dec;204(3):513-518. doi: 10.1016/j.jsb.2018.10.005. Epub 2018 Oct 16.
DcrB is an 18 kDa lipoprotein that contains a single domain of unknown function. DcrB is found within Enterobacteriaceae, a family of Gram-negative bacteria which includes pathogens that can cause food-borne illness and hospital-acquired infections. In Salmonella enterica serovar Typhimurium, DcrB is up-regulated by conditions that promote the production of known virulence factors. We determined the structure of a truncated form of DcrB from Salmonella to 1.92 Å resolution by X-ray crystallography. This truncated form, DcrBΔ37, contains the entire domain of unknown function but lacks the lipoprotein signal sequence (residues 1-20) as well as residues 21-37. The DcrBΔ37 monomer contains the Mog1p/PsbP-like fold, which is found in functionally diverse proteins in mammals, yeast, plants, and cyanobacteria. Interestingly, DcrBΔ37 crystallized as a domain-swapped homodimer in which the N-terminal β-hairpin extends from one protomer to interact with the core of the second protomer. This domain-swapping indicates that the N-terminal portion of the Mog1p/PsbP-like fold likely has conformational flexibility. Overall, our results provide the first example of an enterobacterial protein that contains the Mog1p/PsbP-like fold and expands knowledge of the structural and phylogenetic diversity of Mog1p/PsbP-like proteins.
DcrB 是一种 18kDa 的脂蛋白,包含一个未知功能的单一结构域。DcrB 存在于肠杆菌科内,这是一类革兰氏阴性细菌,其中包括可导致食源性疾病和医院获得性感染的病原体。在鼠伤寒沙门氏菌中,DcrB 可通过促进已知毒力因子产生的条件上调。我们通过 X 射线晶体学确定了鼠伤寒沙门氏菌中 DcrB 的截断形式的结构,分辨率为 1.92Å。这种截断形式的 DcrBΔ37 包含完整的未知功能结构域,但缺乏脂蛋白信号序列(残基 1-20)以及残基 21-37。DcrBΔ37 单体包含 Mog1p/PsbP 样折叠,该折叠存在于哺乳动物、酵母、植物和蓝细菌中功能多样化的蛋白质中。有趣的是,DcrBΔ37 以同源二聚体形式结晶,其中 N 端β发夹从一个单体延伸出来与第二个单体的核心相互作用。这种结构域交换表明 Mog1p/PsbP 样折叠的 N 端部分可能具有构象灵活性。总体而言,我们的结果提供了第一个包含 Mog1p/PsbP 样折叠的肠杆菌科蛋白质的例子,并扩展了对 Mog1p/PsbP 样蛋白结构和系统发育多样性的认识。