Department of Biochemistry , McGill University , Montréal , Québec H3G 0B1 , Canada.
Department of Molecular and Cellular Biology , University of Guelph , Guelph , Ontario N1G 2W1 , Canada.
ACS Chem Biol. 2018 Nov 16;13(11):3161-3172. doi: 10.1021/acschembio.8b00739. Epub 2018 Oct 30.
Nonribosomal peptide synthetases (NRPSs) increase the chemical diversity of their products by acquiring tailoring domains. Linear gramicidin synthetase starts with a tailoring formylation (F) domain, which likely originated from a sugar formyltransferase (FT) gene. Here, we present studies on an Anoxybacillus kamchatkensis sugar FT representative of the prehorizontal gene transfer FT. Gene cluster analysis reveals that this FT acts on a UDP-sugar in a novel pathway for synthesis of a 7-formamido derivative of CMP-pseudaminic acid. We recapitulate the pathway up to and including the formylation step in vitro, experimentally demonstrating the role of the FT. We also present X-ray crystal structures of the FT alone and with ligands, which unveil contrasts with other structurally characterized sugar FTs and show close structural similarity with the F domain. The structures reveal insights into the adaptations that were needed to co-opt and evolve a sugar FT into a functional and useful NRPS domain.
非核糖体肽合成酶 (NRPSs) 通过获取修饰结构域来增加其产物的化学多样性。线性短杆菌肽合成酶以修饰甲酰化 (F) 结构域开始,该结构域可能源自糖基甲酰转移酶 (FT) 基因。在这里,我们研究了一种代表预水平基因转移 FT 的 kamchatkensis 属 Anoxybacillus 糖基 FT。基因簇分析表明,该 FT 在一个新颖的途径中作用于 UDP-糖,用于合成 CMP-假氨基糖的 7-甲酰胺衍生物。我们在体外重现了该途径,直至包括甲酰化步骤,实验证明了 FT 的作用。我们还展示了 FT 及其配体的 X 射线晶体结构,这些结构揭示了与其他结构特征糖基 FT 的差异,并与 F 结构域具有密切的结构相似性。这些结构揭示了在共选和进化糖基 FT 成为功能性和有用的 NRPS 结构域时所需的适应机制。