University of Chemical Technology Prague, Technická 3, Prague 6, 166 28, Czech Republic.
University of Chemical Technology Prague, Technická 3, Prague 6, 166 28, Czech Republic.
Plant Sci. 2018 Nov;276:152-161. doi: 10.1016/j.plantsci.2018.08.011. Epub 2018 Aug 24.
A unique analysis of an enzyme activity versus structure modification of the tomato nuclease R-TBN1 is presented. R-TBN1, the non-specific nuclease belonging to the S1-P1 nuclease family, was recombinantly produced in N. benthamiana. The native structure is posttranslationally modified by N-glycosylation at three sites. In this work, it was found that this nuclease is modified by high-mannose type N-glycosylation with a certain degree of macro- and microheterogeneity. To monitor the role of N-glycosylation in its activity, hypo- and hyperglycosylated nuclease mutants, R-TBN1 digested by α-mannosidase, and R-TBN1 deglycosylated by PNGase F were prepared. Deglycosylated R-TBN1 and mutant N94D/N112D were virtually inactive. Compared to R-TBN1 wt, both N94D and N112D mutants showed about 60% and 10% of the activity, respectively, while the N186D, D36S, and D36S/E104 N mutants were equally or even more active than R-TBN1 wt. The partial demannosylation of R-TBN1 did not affect the nuclease activity; moreover, a little shift in substrate specificity was observed. The results show two facts: 1) which sites must be occupied by a glycan for the proper folding and stability and 2) how N. benthamiana glycosylates the foreign nuclease. At the same time, the modifications can be interesting in designing the nuclease activity or specificity through its glycosylation.
本文对番茄核酸酶 R-TBN1 的酶活性与结构修饰进行了独特的分析。R-TBN1 是一种非特异性核酸酶,属于 S1-P1 核酸酶家族,在 N. benthamiana 中重组表达。其天然结构通过三个位点的 N-糖基化进行翻译后修饰。在这项工作中,发现该核酸酶被高甘露糖型 N-糖基化修饰,具有一定程度的宏观和微观异质性。为了监测 N-糖基化在其活性中的作用,制备了低聚糖和高聚糖核酸酶突变体、用α-甘露糖苷酶消化的 R-TBN1 以及用 PNGase F 去糖基化的 R-TBN1。去糖基化的 R-TBN1 和突变体 N94D/N112D 几乎没有活性。与 R-TBN1 wt 相比,N94D 和 N112D 突变体的活性分别约为 60%和 10%,而 N186D、D36S 和 D36S/E104N 突变体的活性与 R-TBN1 wt 相当甚至更高。R-TBN1 的部分去糖基化并不影响核酸酶活性;此外,观察到底物特异性略有变化。结果表明了两个事实:1)糖基化必须占据特定的位点,以保证正确的折叠和稳定性;2)N. benthamiana 如何对异源核酸酶进行糖基化。同时,这些修饰可能通过其糖基化来设计核酸酶的活性或特异性,具有一定的研究意义。