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通过计算方法阐明蛋白质-蛋白质相互作用,并针对各种疾病设计小分子抑制剂。

Elucidating Protein-protein Interactions Through Computational Approaches and Designing Small Molecule Inhibitors Against them for Various Diseases.

机构信息

Department of Biotechnology, Indian Institute of Technology Roorkee, Roorkee - 247667, Uttarakhand, India.

Cellular and Molecular Neurobiology Unit, Indian Institute of Technology Jodhpur, Jodhpur - 342011, Rajasthan, India.

出版信息

Curr Top Med Chem. 2018;18(20):1719-1736. doi: 10.2174/1568026618666181025114903.

Abstract

BACKGROUND

To carry out wide range of cellular functionalities, proteins often associate with one or more proteins in a phenomenon known as Protein-Protein Interaction (PPI). Experimental and computational approaches were applied on PPIs in order to determine the interacting partners, and also to understand how an abnormality in such interactions can become the principle cause of a disease.

OBJECTIVE

This review aims to elucidate the case studies where PPIs involved in various human diseases have been proven or validated with computational techniques, and also to elucidate how small molecule inhibitors of PPIs have been designed computationally to act as effective therapeutic measures against certain diseases.

RESULTS

Computational techniques to predict PPIs are emerging rapidly in the modern day. They not only help in predicting new PPIs, but also generate outputs that substantiate the experimentally determined results. Moreover, computation has aided in the designing of novel inhibitor molecules disrupting the PPIs. Some of them are already being tested in the clinical trials.

CONCLUSION

This review delineated the classification of computational tools that are essential to investigate PPIs. Furthermore, the review shed light on how indispensable computational tools have become in the field of medicine to analyze the interaction networks and to design novel inhibitors efficiently against dreadful diseases in a shorter time span.

摘要

背景

为了实现广泛的细胞功能,蛋白质通常会与一种或多种蛋白质相互作用,这种现象被称为蛋白质-蛋白质相互作用(PPI)。实验和计算方法被应用于 PPIs 以确定相互作用的伙伴,也可以了解这种相互作用的异常如何成为疾病的主要原因。

目的

本综述旨在阐明涉及各种人类疾病的 PPI 已通过计算技术得到证实或验证的案例研究,也阐明了如何通过计算设计小分子 PPI 抑制剂作为针对某些疾病的有效治疗措施。

结果

预测 PPI 的计算技术在现代迅速兴起。它们不仅有助于预测新的 PPI,而且还生成了与实验确定结果相符的输出。此外,计算还辅助设计了新型抑制剂分子来破坏 PPI。其中一些已经在临床试验中进行了测试。

结论

本综述描述了研究 PPI 必不可少的计算工具的分类。此外,该综述还阐明了计算工具在医学领域变得多么不可或缺,以便在更短的时间内分析相互作用网络并有效地设计针对可怕疾病的新型抑制剂。

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