Zoology and Botany Department, São José do Rio Preto campus (IBILCE), São Paulo State University (UNESP), R. Cristóvão Colombo, 2265 - BR15054-000, S. J. Rio Preto (SP), Brazil.
Microbiology Graduate Program (IBILCE/UNESP), Zoology and Botany Department, São José do Rio Preto campus (IBILCE), São Paulo State University (UNESP), R. Cristóvão Colombo, 2265 - BR15054-000, S. J. Rio Preto (SP), Brazil.
J Phycol. 2019 Feb;55(1):146-159. doi: 10.1111/jpy.12805. Epub 2018 Nov 26.
A new Phormidium-like genus was found during an investigation of Oscillatoriales diversity in Brazil. Eight aerophytic populations from south and southeastern regions were isolated in monospecific cultures and submitted to polyphasic evaluation. The populations presented homogeneous morphology with straight trichomes, not attenuated, and apical cell with thickened cell wall. Phylogenetic analyses based on 16S rRNA gene sequences showed that these populations, plus the Brazilian strain Phomidium sp. B-Tom from GenBank, formed a highly supported and distinctive clade, which corresponds to the new genus Pycnacronema, comprising six new species: P. brasiliensis (type species), P. arboriculum, P. conicum, P. marmoreum, P. rubrum, and P. savannensis. These results were confirmed and supported by rpoC1 and rbcL genes evaluated independently and by the concatenated analysis of 16S rRNA, rpoC1 and rbcL genes (for all species but P. savannensis). Secondary structures of the D1-D1', box-B, and V3 regions of the internal transcribed spacer were informative at specific level, being conserved in P. brasiliensis and variable among the other strains, also confirming the phylogenetic analyses. The generic name and specific epithets of the new taxa are proposed under the provisions of the International Code of Nomenclature of algae, fungi, and plants.
在对巴西振荡器目多样性的调查中发现了一个新的类似 Phormidium 的属。从南部和东南部地区分离出的 8 个气生种群在单种培养物中进行了分离,并进行了多相评估。这些种群表现出均匀的形态,具有直的藻丝,不逐渐变细,顶细胞细胞壁增厚。基于 16S rRNA 基因序列的系统发育分析表明,这些种群加上巴西菌株 Phomidium sp. B-Tom 从 GenBank 形成了一个高度支持和独特的分支,对应于新属 Pycnacronema,包括六个新种:P. brasiliensis(模式种)、P. arboriculum、P. conicum、P. marmoreum、P. rubrum 和 P. savannensis。这些结果得到了 rpoC1 和 rbcL 基因的独立评估以及 16S rRNA、rpoC1 和 rbcL 基因串联分析的证实和支持(除了 P. savannensis 之外,所有物种都如此)。内部转录间隔区的 D1-D1'、box-B 和 V3 区的二级结构在特定水平上具有信息性,在 P. brasiliensis 中保守,而在其他菌株中可变,这也证实了系统发育分析。新分类群的属名和种加词是根据藻类、真菌和植物国际命名法规的规定提出的。