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计算探索分子介质对 5-氨基水杨酸偶氮前药互变异构的影响。

Computational exploration of the effect of molecular medium on the tautomerization of azo prodrug of 5-aminosalicylic acid.

机构信息

Department of Chemistry and Earth Sciences, College of Arts and Science, Qatar University, Doha, P.O. Box 2713, Qatar.

Department of Chemistry and Earth Sciences, College of Arts and Science, Qatar University, Doha, P.O. Box 2713, Qatar.

出版信息

J Mol Graph Model. 2019 Jan;86:160-169. doi: 10.1016/j.jmgm.2018.10.015. Epub 2018 Oct 19.

DOI:10.1016/j.jmgm.2018.10.015
PMID:30366192
Abstract

The characterization of potential tautomerization of pharmaceutical materials has significant importance. Sulfasalazine (SSZ) is a prodrug that bears 5-aminosalicylic acid and pyridylamino-sulfonyl-phenyl moieties bridged by the azo group. SSZ may be present in various tautomeric forms, where dual tautomerization may occur; namely, amide↔imide and azo↔hydrazone tautomerization through the pyridylamino-sulfonyl-phenyl and salicylic acid moieties, respectively. In this report, we describe the prospects of the effect of molecular medium on the tautomerization of SSZ using selected computational methods. Two approaches were deliberated; namely, the explicit intermolecular hydrogen bonding (HB) through complexation with dimethylformamide (DMF) and implicit solvent effects. Using the DFT/ωB97XD/6-31G+(d) calculations, we conducted geometry optimization calculations of all possible tautomers of SSZ and their corresponding HB complexes with DMF with stoichiometric ratios (SSZ:DMF) of 1:1 and 1:2. The stability of the SSZ tautomeric forms and their corresponding H-Bonded DMF complexes were examined employing the ADMP molecular dynamics approach. Obtained results demonstrate that the amide and azo tautomers are favored over imide and hydrazone in the gas phase with E of 8.3 and 12.8 kcal/mol, respectively. However, these preferences were significantly affected by the implicit solvation effect of water with ΔE of 0.5 and 3.1 kcal mol, respectively. Obtained results demonstrate as well that DMF can bind to various sites of SSZ tautomers through intermolecular HBs with length in the range of 1.76-2.39 Å. This in turn demonstrates that intramolecular and intermolecular HB could not only play a significant role in directing the favored tautomeric forms of SSZ, but also distorting the planarity of the molecular comprising the azo and phenyl groups of the SSZ molecule. The ADMP-MD results verified that these complexes and the corresponding intra- and intermolecular HBs are stable over a timeframe of 100 femtosecond. The NBO analysis of the optimized geometries revealed that SSZ:DMF complexes can be stabilized by strong intermolecular HB, as indicated by the second perturbation energy of interaction (E(2)). Moreover, these results showed that the intermolecular HB of SSZ:DMF complexes has a notable effect on reducing the strength of intramolecular HB of certain tautomeric forms of SSZ and hence promotes the preference of SSZ toward a specific tautomeric form.

摘要

药物材料潜在互变异构的特征具有重要意义。柳氮磺胺吡啶(SSZ)是一种前药,含有 5-氨基水杨酸和吡啶基氨基磺酰基-苯基部分,通过偶氮基团连接。SSZ 可能存在多种互变异构形式,其中可能发生双重互变异构,即通过吡啶基氨基磺酰基-苯基和水杨酸部分分别发生酰胺↔异酰胺和偶氮↔腙互变异构。在本报告中,我们使用选定的计算方法描述了分子介质对 SSZ 互变异构的影响的前景。考虑了两种方法;即通过与二甲基甲酰胺(DMF)络合的显式分子间氢键(HB)和隐式溶剂效应。使用 DFT/ωB97XD/6-31G+(d)计算,我们对 SSZ 的所有可能互变异构体及其与 DMF 的相应 HB 配合物进行了几何优化计算,化学计量比(SSZ:DMF)为 1:1 和 1:2。使用 ADMP 分子动力学方法研究了 SSZ 互变异构形式及其相应的 H 键合 DMF 配合物的稳定性。得到的结果表明,酰胺和偶氮互变异构体在气相中优先于异酰胺和腙,分别为 8.3 和 12.8 kcal/mol。然而,这些偏好受到水的隐式溶剂效应的显著影响,分别为 0.5 和 3.1 kcal/mol。结果还表明,DMF 可以通过长度在 1.76-2.39 Å 范围内的分子间氢键与 SSZ 互变异构体结合到各种部位。这反过来又表明,分子内和分子间 HB 不仅可以在指导 SSZ 有利的互变异构形式方面发挥重要作用,还可以扭曲包含 SSZ 分子的偶氮和苯基部分的分子的平面性。ADMP-MD 结果验证了这些配合物和相应的分子内和分子间 HB 在 100 飞秒的时间范围内是稳定的。优化几何形状的 NBO 分析表明,SSZ:DMF 配合物可以通过强分子间 HB 稳定,如相互作用的第二微扰能(E(2))所示。此外,这些结果表明,SSZ:DMF 配合物的分子间 HB 对降低 SSZ 某些互变异构形式的分子内 HB 的强度有显著影响,从而促进 SSZ 对特定互变异构形式的偏好。

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