Pincus M R, Carty R P, Chen J, Lubowsky J, Avitable M, Shah D, Scheraga H A, Murphy R B
Proc Natl Acad Sci U S A. 1987 Jul;84(14):4821-5. doi: 10.1073/pnas.84.14.4821.
The biologically active conformations of a series of four peptides [four cholecystokinin (CCK)-related peptides and enkephalin] in their interactions with gastrointestinal receptors have been deduced using conformational computational analysis. The two peptides that interact exclusively with peripheral-type CCK receptors are the heptapeptide COOH-terminal fragment from CCK (CCK-7) and the analogous sequence from cerulein (CER-7) in which threonine replaces the methionine proximal to the NH2 terminus. The two peptides that interact exclusively with the gastrin receptor in the stomach are the active COOH-terminal fragment of little gastrin and the COOH-terminal tetrapeptide sequence common to all of these peptides, CCK-4. We find that preferred conformations for the peripherally active peptides CCK-7 and CER-7 are principally beta-bends, whereas little gastrin and CCK-4 are fundamentally helical. In the class of lowest energy structures for both CCK-7 and CER-7, the aromatic rings of the tyrosine and phenylalanine lie close to one another whereas the tryptophan indole ring points in the opposite direction. This structure is superimposable on the structures of a set of rigid indolyl benzodiazepine derivatives that interact with complete specificity and high affinity with peripheral CCK receptors further suggesting that the computed beta-bends are the biologically active conformation. The biologically active conformation for CCK-4 and the little gastrin hexapeptide has also been deduced. By excluding conformations common to CCK-7 and CCK-4, which do not bond to each other's receptors, and then by selecting conformations in common to CCK-4 and the gastrin-related hexapeptide, which do bind to each other's receptors, we deduce that the biologically active conformation at the gastrin receptor is partly helical and one in which the indole of tryptophan and the aromatic ring of phenylalanine are close to one another while the methionine and aspartic acid side chains point in the opposite direction. These major differences in preferred structures between the common CCK-7/CER-7 peptides and the common CCK-4/little gastrin peptides explain the mutually exclusive activities of these two sets of peptides. We have observed that [Met]enkephalin strongly antagonizes the action of the naturally occurring peripherally active CCK-8 (CCK-7 with an NH2-terminal aspartic acid residue added). The computed lowest energy structures for this opiate peptide closely resemble key features of the computed CCK-7/CER-7 structure, further supporting the proposed structure.
通过构象计算分析,已推导了一系列四种肽(四种胆囊收缩素(CCK)相关肽和脑啡肽)与胃肠道受体相互作用时的生物活性构象。专门与外周型CCK受体相互作用的两种肽是CCK的七肽COOH末端片段(CCK-7)和来自雨蛙素的类似序列(CER-7),其中苏氨酸取代了靠近NH2末端的甲硫氨酸。专门与胃中的胃泌素受体相互作用的两种肽是小胃泌素的活性COOH末端片段以及所有这些肽共有的COOH末端四肽序列CCK-4。我们发现,外周活性肽CCK-7和CER-7的优选构象主要是β-转角,而小胃泌素和CCK-4基本上是螺旋结构。在CCK-7和CER-7的最低能量结构类别中,酪氨酸和苯丙氨酸的芳香环彼此靠近,而色氨酸吲哚环指向相反方向。该结构与一组刚性吲哚基苯并二氮杂卓衍生物的结构重叠,这些衍生物与外周CCK受体具有完全特异性和高亲和力相互作用,进一步表明计算出的β-转角是生物活性构象。CCK-4和小胃泌素六肽的生物活性构象也已推导出来。通过排除CCK-7和CCK-4共有的、不与彼此受体结合的构象,然后选择CCK-4和胃泌素相关六肽共有的、确实与彼此受体结合的构象,我们推断胃泌素受体处的生物活性构象部分是螺旋结构,且其中色氨酸的吲哚和苯丙氨酸的芳香环彼此靠近,而甲硫氨酸和天冬氨酸侧链指向相反方向。常见的CCK-7/CER-7肽与常见的CCK-4/小胃泌素肽在优选结构上的这些主要差异解释了这两组肽相互排斥的活性。我们观察到[Met]脑啡肽强烈拮抗天然存在的外周活性CCK-8(添加了NH2末端天冬氨酸残基的CCK-7)的作用。该阿片肽计算出的最低能量结构与计算出的CCK-7/CER-7结构的关键特征非常相似,进一步支持了所提出的结构。