Song Wei, Duan Liping, Zhao Junwei, Jiang Shanwen, Guo Xiaowei, Xiang Wensheng, Wang Xiangjing
1Key Laboratory of Agriculture Biological Functional Gene of Heilongjiang Provincial Education Committee, Northeast Agricultural University, No. 59 Mucai Street, Xiangfang District, Harbin 150030, PR China.
2State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, PR China.
Int J Syst Evol Microbiol. 2018 Nov;68(11):3441-3446. doi: 10.1099/ijsem.0.003007.
A novel actinobacterium, designated strain NEAU-SW521, was isolated from soil collected from Xianglu Mountain, Heilongjiang province, north PR China. The results of analysis of the 16S rRNA gene indicated that NEAU-SW521 represented a member of the genus Kribbella. The results of phylogenetic analyses using the 16S rRNA gene and multilocus sequence analysis using the concatenated gene sequences of the gyrB, rpoB, relA, recA and atpD genes all indicated that the strain formed a clade with Kribbella alba DSM 15500 (99.16 %), Kribbella ginsengisoli JCM 16928 (98.96 %), Kribbella catacumbae JCM 14968 (98.82 %), Kribbella sancticallisti JCM 14969 (98.62 %), Kribbella qitaiheensis NEAU-GQTH2-3 (98.61 %) and Kribbella koreensis JCM 10977 (98.47 %). The cell wall contained ll-diaminopimelic acid as the major diamino acid and the whole-cell hydrolysates were ribose, glucose and galactose. The major polar lipids were diphosphatidylglycerol, phosphatidylcholine, phosphatidylglycerol, phosphatidylinositol and an unidentified phospholipid. The predominant menaquinone was MK-9(H4). Major fatty acids were iso-C16 : 0 and anteiso-C15 : 0. These chemotaxonomic data supported the affiliation of NEAU-SW521 to the genus Kribbella. The DNA G+C content was 67.8 mol%. Furthermore, the strain could be clearly distinguished by concatenated gene genetic distances, the combination of DNA-DNA hybridization results and some phenotypic characteristics. Therefore, it is proposed that NEAU-SW521 represents a novel species of the genus Kribbella, for which the name Kribbellamonticola sp. nov. is proposed. The type strain is NEAU-SW521 (=CGMCC 4.7465=DSM 105770).
从中国东北黑龙江省香炉山采集的土壤中分离出一株新型放线菌,命名为菌株NEAU-SW521。16S rRNA基因分析结果表明,NEAU-SW521属于克里贝拉属。使用16S rRNA基因进行的系统发育分析以及使用gyrB、rpoB、relA、recA和atpD基因的串联基因序列进行的多位点序列分析结果均表明,该菌株与白色克里贝拉DSM 15500(99.16%)、人参克里贝拉JCM 16928(98.96%)、卡塔昆巴克里贝拉JCM 14968(98.82%)、圣卡利斯特里克里贝拉JCM 14969(98.62%)、七台河克里贝拉NEAU-GQTH2-3(98.61%)和韩国克里贝拉JCM 10977(98.47%)形成一个分支。细胞壁以ll-二氨基庚二酸作为主要二氨基酸,全细胞水解产物为核糖、葡萄糖和半乳糖。主要极性脂为双磷脂酰甘油、磷脂酰胆碱、磷脂酰甘油、磷脂酰肌醇和一种未鉴定的磷脂。主要甲基萘醌为MK-9(H4)。主要脂肪酸为异-C16 : 0和anteiso-C15 : 0。这些化学分类数据支持NEAU-SW521属于克里贝拉属。DNA G+C含量为67.8 mol%。此外,该菌株可通过串联基因遗传距离、DNA-DNA杂交结果和一些表型特征进行明确区分。因此,建议将NEAU-SW521作为克里贝拉属的一个新物种,命名为蒙蒂克里贝拉(Kribbellamonticola sp. nov.)。模式菌株为NEAU-SW521(=CGMCC 4.7465=DSM 105770)。