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在来自鲁米努斯梭菌的阿拉伯呋喃糖苷酶中,层粘连蛋白 G_3 模块的功能作为碳水化合物结合模块。

Function of a laminin_G_3 module as a carbohydrate-binding module in an arabinofuranosidase from Ruminiclostridium josui.

机构信息

Graduate School of Bioresources, Mie University, Tsu, Japan.

出版信息

FEBS Lett. 2019 Jan;593(1):42-51. doi: 10.1002/1873-3468.13283. Epub 2018 Nov 21.

Abstract

Laminin_G_3 modules can exist together with family-43 catalytic modules of glycoside hydrolase (GH43), but their functions are unknown. Here, a laminin_G_3 module and a GH43 module derived from a Ruminiclostridium josui modular arabinofuranosidase Abf43A-Abf43B-Abf43C were produced individually as RjLG3 and RjGH43_22, respectively, or combined as RjGH43-1 to gain insights into their activities. Isothermal calorimetry analysis showed that RjLG3 has high affinity toward 3 -α-l-arabinofuranosyl-(1,5)-α-l-arabinotriose but not for α-1,5-linked arabinooligosaccharides, which suggests that RjLG3 interacts specifically with a branched arabinofuranosyl residue of an arabinooligosaccharide but not an arabinofuranosyl residue at the end of α-1,5-linked arabinooligosaccharides. RjGH43-1 (with CBM) shows higher activity toward sugar beet arabinan than RjGH43_22 (without CBM), which suggests that the LG3 module in RjGH43-1 plays an important role in substrate hydrolysis as a carbohydrate-binding module.

摘要

层粘连蛋白 G_3 模块可以与糖苷水解酶(GH43)家族 43 的催化模块共存,但它们的功能尚不清楚。在这里,从瘤胃拟杆菌(Ruminiclostridium josui)的模块化阿拉伯呋喃糖苷酶 Abf43A-Abf43B-Abf43C 中分别产生了一个层粘连蛋白 G_3 模块和一个 GH43 模块,分别称为 RjLG3 和 RjGH43_22,或组合成 RjGH43-1,以深入了解它们的活性。等温热力学分析表明,RjLG3 对 3-α-l-阿拉伯呋喃糖基-(1,5)-α-l-阿拉伯三糖具有高亲和力,但对α-1,5-连接的阿拉伯低聚糖没有亲和力,这表明 RjLG3 与阿拉伯低聚糖的支化阿拉伯呋喃糖残基特异性相互作用,而不是与α-1,5-连接的阿拉伯低聚糖末端的阿拉伯呋喃糖残基相互作用。具有 CBM 的 RjGH43-1(RjGH43-1)对糖甜菜阿拉伯聚糖的活性高于没有 CBM 的 RjGH43_22(RjGH43_22),这表明 RjGH43-1 中的 LG3 模块作为碳水化合物结合模块在底物水解中起着重要作用。

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