Department of Structural and Computational Biology, Max F. Perutz Laboratories, Vienna Biocenter Campus 5, 1030, Vienna, Austria.
CERM and Department of Chemistry "Ugo Schiff", University of Florence, Via Luigi Sacconi 6, 50019 Sesto Fiorentino, Florence, Italy.
Chembiochem. 2019 Feb 1;20(3):335-339. doi: 10.1002/cbic.201800539. Epub 2018 Dec 10.
Intrinsically disordered proteins (IDPs) carry out many biological functions. They lack a stable 3D structure and are able to adopt many different conformations in dynamic equilibrium. The interplay between local dynamics and global rearrangements is key for their function. A widely used experimental NMR spectroscopy approach to study long-range contacts in IDPs exploits paramagnetic effects, and H detection experiments are generally used to determine paramagnetic relaxation enhancement (PRE) for amide protons. However, under physiological conditions, exchange broadening hampers the detection of solvent-exposed amide protons, which reduces the content of information available. Herein, we present an experimental approach based on direct carbon detection of PRE that provides improved resolution, reduced sensitivity to exchange broadening, and complementary information derived from the use of different starting polarization sources.
无规卷曲蛋白质(IDPs)执行许多生物功能。它们缺乏稳定的 3D 结构,并且能够在动态平衡中采用许多不同的构象。局部动力学和全局重排之间的相互作用是其功能的关键。一种广泛使用的实验 NMR 光谱学方法来研究 IDPs 中的长程接触利用顺磁效应,并且 H 检测实验通常用于确定酰胺质子的顺磁弛豫增强(PRE)。然而,在生理条件下,交换增宽会阻碍溶剂暴露的酰胺质子的检测,从而降低了可用信息的含量。在此,我们提出了一种基于 PRE 的直接碳检测的实验方法,该方法提供了改进的分辨率、降低了对交换增宽的敏感性以及来自使用不同起始极化源的互补信息。