Lenci Elena, Innocenti Riccardo, Menchi Gloria, Trabocchi Andrea
Department of Chemistry "Ugo Schiff", University of Florence, Florence, Italy.
Front Chem. 2018 Oct 30;6:522. doi: 10.3389/fchem.2018.00522. eCollection 2018.
Diversity-Oriented Synthesis (DOS) consists of generating structurally diverse compounds from a complexity-generating reaction followed by cyclization steps and appendage diversity. DOS has gathered interest to systematically explore the chemical space by generating high-quality small-molecule collections as probes to investigate biological pathways. The generation of heterocycles using amino acid and sugar derivatives as building blocks is a powerful approach to access chemical and geometrical diversity thanks to the high number of stereocenters and the polyfunctionality of such compounds. Our efforts in this field are focused on the generation of diversity-oriented molecules of peptidomimetic nature as a tool addressing protein-protein interactions, taking advantage of amino acid- and sugar-derived polyfunctional building blocks to be applied in couple-pair synthetic approaches. In this paper, the combination of diversity-oriented synthesis and chemoinformatics analysis of chemical space and molecular diversity of heterocyclic peptidomimetics are reported, with particular interest toward carbohydrate- and amino acid-derived morpholine scaffolds with a higher fraction of sp carbon atoms. Also, the chemoinformatic analysis of chemical space and molecular diversity of 186 morpholine peptidomimetics is outlined.
多样性导向合成(DOS)包括通过一个能产生复杂性的反应生成结构多样的化合物,随后进行环化步骤和附加基团多样性操作。DOS通过生成高质量的小分子集合作为研究生物途径的探针,已引起人们对系统探索化学空间的兴趣。利用氨基酸和糖衍生物作为构建单元生成杂环化合物,由于此类化合物中存在大量立体中心和多功能性,是一种获取化学和几何多样性的有效方法。我们在该领域的工作重点是生成具有拟肽性质的多样性导向分子,作为一种解决蛋白质-蛋白质相互作用的工具,利用氨基酸和糖衍生的多功能构建单元应用于偶联对合成方法。本文报道了多样性导向合成与杂环拟肽化学空间和分子多样性的化学信息学分析的结合,特别关注具有较高sp碳原子比例的碳水化合物和氨基酸衍生的吗啉骨架。此外,还概述了186种吗啉拟肽的化学空间和分子多样性的化学信息学分析。