Suppr超能文献

人类免疫缺陷病毒蛋白酶抑制剂与克氏锥虫天冬氨酰蛋白酶之间的对接模拟

Docking simulation between HIV peptidase inhibitors and Trypanosoma cruzi aspartyl peptidase.

作者信息

Castilho Vanessa V S, Gonçalves Keyla C S, Rebello Karina M, Baptista Luiz P R, Sangenito Leandro S, Santos Helena L C, Branquinha Marta H, Santos André L S, Menna-Barreto Rubem F S, Guimarães Ana C, d'Avila-Levy Claudia M

机构信息

Laboratório de Genômica Funcional e Bioinformática, Instituto Oswaldo Cruz, Fundação Oswaldo Cruz, Rio de Janeiro, Brazil.

Laboratório de Estudos Integrados em Protozoologia, Instituto Oswaldo Cruz, Fundação Oswaldo Cruz, Rio de Janeiro, Brazil.

出版信息

BMC Res Notes. 2018 Nov 21;11(1):825. doi: 10.1186/s13104-018-3927-z.

Abstract

OBJECTIVE

The low investment in research, diagnosis and treatment are factors that contribute to the continuity of Chagas' disease as a neglected tropical diseases (NTDs). In this context, the repositioning of drugs represents a useful strategy, in the search for new chemotherapeutic approaches for NTDs. HIV aspartic peptidase inhibitors (HIV IPs) are good candidates for drug repurposing. Here, we modeled the three dimensional structure of an aspartyl peptidase of Trypanosoma cruzi, the causative agent of Chagas' disease, aligned it to the HIV aspartyl peptidase and performed docking binding assays with the HIV PIs.

RESULTS

The 3D structure confirmed the presence of acid aspartic residues, which are critical to enzyme activity. The docking experiment revealed that HIV IPs bind to the active site of the enzyme, being ritonavir and lopinavir the ones with greater affinity. Benznidazole presented the worst binding affinity, this drug is currently used in Chagas' disease treatment and was included as negative control. These results together with previous data on the trypanocidal effect of the HIV PIs support the hypothesis that a T. cruzi aspartyl peptidase can be the intracellular target of these inhibitors. However, the direct demonstration of the inhibition of T. cruzi aspartyl peptidase activity by HIV PIs is still a goal to be persuaded.

摘要

目的

研究、诊断和治疗方面的低投入是导致恰加斯病作为一种被忽视的热带病(NTDs)持续存在的因素。在此背景下,药物重新定位是一种有用的策略,可用于寻找针对NTDs的新化疗方法。HIV天冬氨酸蛋白酶抑制剂(HIV IPs)是药物重新利用的良好候选药物。在此,我们对恰加斯病病原体克氏锥虫的天冬氨酰蛋白酶的三维结构进行建模,将其与HIV天冬氨酰蛋白酶进行比对,并与HIV蛋白酶抑制剂进行对接结合试验。

结果

三维结构证实了酸性天冬氨酸残基的存在,这些残基对酶活性至关重要。对接实验表明,HIV IPs与该酶的活性位点结合,其中利托那韦和洛匹那韦的亲和力更强。苯硝唑的结合亲和力最差,该药物目前用于恰加斯病的治疗,并被用作阴性对照。这些结果连同先前关于HIV蛋白酶抑制剂杀锥虫作用的数据支持了克氏锥虫天冬氨酰蛋白酶可能是这些抑制剂细胞内靶点的假设。然而,直接证明HIV蛋白酶抑制剂对克氏锥虫天冬氨酰蛋白酶活性的抑制作用仍是一个有待实现的目标。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/315b/6249910/3395a158c6bc/13104_2018_3927_Fig1_HTML.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验