Asatryan Rubik, Pal Yudhajit, Hachmann Johannes, Ruckenstein Eli
Department of Chemical and Biological Engineering , University at Buffalo, The State University of New York , Buffalo , New York 14260 , United States.
Computational and Data-Enabled Science and Engineering Graduate Program , University at Buffalo, The State University of New York , Buffalo , New York 14260 , United States.
J Phys Chem A. 2018 Dec 27;122(51):9738-9754. doi: 10.1021/acs.jpca.8b08690. Epub 2018 Dec 11.
Diol radicals (DRs) are important intermediates in biocatalysis, atmospheric chemistry, and biomass combustion. They are particularly generated from photolysis of halogenated diols and addition of hydroxyl radical to a double bond of unsaturated alcohols, such as lignols. The energized DRs further isomerize/decompose to form products, including water. Aqueous-phase dehydration in radiolytic and biomimetic systems typically occurs at low temperatures, with or without catalysis, whereas the gas-phase dehydration is usually considered energetically unfavorable. In the present study, we propose a new low-energy, roaming-like mechanism based on a detailed dispersion-corrected DFT and ab initio level analysis of the gas-phase dehydration of DRs obtained from the combination of OH radicals with allyl alcohol (AA, CH═CHCHOH)-the simplest relevant model of the unsaturated alcohols. The roaming pathways involve a nearly dissociated OH-group, which subsequently abstracts an H atom of the remaining fragment to form water and [CHO] radical via a transition state (TS) with energy close to the C-O bond fission asymptote. Two types of roaming-like first-order saddle points (SP) are identified for unimolecular dehydration of 1,2- and 1,3-DR radical adducts involving either both hydroxyl groups of diol radicals to generate an oxygen-centered radical, or β-OH group and a skeletal α-hydrogen atom of the 1,2-DR to form a resonantly stabilized hydroxyallyl radical. Two higher energy conventional (tight) transition states, along with the pathways to 1,2-OH-migration, as well as direct H-abstraction, are also identified and analyzed. Most of the traditional density functional theory methods that have been successfully employed in the literature to locate so-far-known roaming SPs were also able to identify the new mechanism, in accord with dispersion-corrected double hybrid B2PLYP-D3(BJ) and mPW2PLYPD methods involving MP2-correlation corrections. However, the MP2 method itself failed to locate any of them, which seems to be typical for MP2 method for loose TS structures, confirmed here for a flat region of PES connecting direct and roaming saddle points. However, MP2 method correctly locates an identical roaming SP for a larger p-coumaryl alcohol model involving hydroxyphenyl substituent at Cγ atom of AA. Two types of interfragmental interactions are identified that stabilize the roaming SPs: (a) H-bonding of the leaving OH radical either with the H atom of the remaining OH group, or with π-cloud of the double bond; (b) direct interaction of π-electrons with the lone-pair electrons of the heteroatom in the leaving OH group through the TS-ring. The alternative TSs are qualitatively characterized by "collinearity" angle of the OH radical attack on the O-H/C-H bonds of the substrate in abstraction-like O-H-O geometry, attributed to the improved orbital overlaps. The proposed mechanism presents broader implications to signify, particularly, a larger role in atmospheric and combustion processes, especially biomass pyrolysis.
二醇自由基(DRs)是生物催化、大气化学和生物质燃烧中的重要中间体。它们特别由卤代二醇的光解以及羟基自由基加成到不饱和醇(如木质醇)的双键上产生。激发态的DRs进一步异构化/分解形成产物,包括水。辐射分解和仿生体系中的水相脱水通常在低温下发生,有或没有催化作用,而气相脱水通常被认为在能量上是不利的。在本研究中,我们基于对由羟基自由基与烯丙醇(AA,CH═CHCHOH)——不饱和醇最简单的相关模型——结合得到的DRs气相脱水的详细色散校正密度泛函理论(DFT)和从头算水平分析,提出了一种新的低能量、类似漫游的机制。漫游途径涉及一个几乎解离的OH基团,随后它夺取剩余片段的一个H原子,通过一个能量接近C - O键断裂渐近线的过渡态(TS)形成水和[CHO]自由基。对于1,2 - 和1,3 - DR自由基加合物的单分子脱水,确定了两种类型的类似漫游的一级鞍点(SP),涉及二醇自由基的两个羟基以生成一个氧中心自由基,或者1,2 - DR的β - OH基团和骨架α - 氢原子以形成一个共振稳定的羟基烯丙基自由基。还确定并分析了两个能量较高的传统(紧密)过渡态,以及1,2 - OH迁移途径和直接H夺取途径。文献中成功用于定位迄今已知漫游SP的大多数传统密度泛函理论方法,也能够识别这种新机制,这与涉及MP2相关校正的色散校正双杂化B2PLYP - D3(BJ)和mPW2PLYPD方法一致。然而,MP2方法本身未能定位到任何一个,这似乎是MP2方法对于松散TS结构的典型情况,在此通过连接直接和漫游鞍点的势能面(PES)的平坦区域得到证实。然而,对于一个在AA的Cγ原子上含有羟基苯基取代基的较大对香豆醇模型,MP2方法正确地定位了一个相同的漫游SP。确定了两种稳定漫游SP的片段间相互作用:(a)离去的OH自由基与剩余OH基团的H原子或双键的π - 云之间的氢键;(b)π - 电子通过TS环与离去OH基团中杂原子上的孤对电子的直接相互作用。替代的TS在定性上以类似抽象的O - H - O几何结构中OH自由基对底物的O - H/C - H键的攻击角度的“共线性”为特征,这归因于轨道重叠的改善。所提出的机制具有更广泛的意义,特别是在大气和燃烧过程中,尤其是生物质热解中发挥更大作用。