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远程15N-1H相关用于辅助蛋白质质子共振序列归属。应用于噬菌体Mu的DNA结合蛋白ner。

Long-range 15N-1H correlation as an aid to sequential proton resonance assignment of proteins. Application to the DNA-binding protein ner from phage Mu.

作者信息

Clore G M, Bax A, Wingfield P, Gronenborn A M

机构信息

Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, Bethesda, MD 20892.

出版信息

FEBS Lett. 1988 Sep 26;238(1):17-21. doi: 10.1016/0014-5793(88)80216-3.

Abstract

A method is described for sequential resonance assignment of protein 1H-NMR spectra relying on the detection of long-range correlations between 15N and C alpha H atoms using 1H-detected heteronuclear multiple-bond correlation spectroscopy. In particular, the observation of the two-bond 15N(i)-C alpha H(i) and three-bond 15N(i)-C alpha H(i-1) correlations enables one to connect one residue with the next. Because the magnitude of the long-range couplings is small (less than 6 Hz), the sensitivity of this experiment is necessarily low and requires the use of 15N-enriched protein samples. Further, because the size of the 15N(i)-C alpha H(i-1) coupling is very sensitive to the psi backbone torsion angle, structural information can be derived. The application of this experiment is illustrated with the 75-residue DNA-binding protein ner from phage Mu.

摘要

本文描述了一种用于蛋白质1H-NMR谱序列共振归属的方法,该方法依赖于使用1H检测的异核多键相关光谱法检测15N与CαH原子之间的长程相关性。特别地,对两键15N(i)-CαH(i)和三键15N(i)-CαH(i-1)相关性的观测能够将一个残基与下一个残基连接起来。由于长程耦合的大小较小(小于6 Hz),该实验的灵敏度必然较低,需要使用15N富集的蛋白质样品。此外,由于15N(i)-CαH(i-1)耦合的大小对ψ主链扭转角非常敏感,因此可以获得结构信息。以噬菌体Mu的75个残基的DNA结合蛋白ner为例说明了该实验的应用。

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