香港一株血培养阳性分离株经直接全基因组测序编译的嗜柠檬酸螺杆菌基因组序列草图
Draft Genome Sequence of Helicobacter cinaedi, Compiled by Direct Whole-Genome Sequencing of a Blood Culture-Positive Isolate in Hong Kong.
作者信息
Chan Wai-Sing, Au Chun-Hang, Leung Henry Chi-Ming, Ho Dona N, Chan Tsun-Leung, Lam Tak-Wah, Ma Edmond Shiu-Kwan, Tang Bone Siu-Fai
机构信息
Department of Pathology, Hong Kong Sanatorium & Hospital, Hong Kong, China.
Department of Computer Science, The University of Hong Kong, Hong Kong, China.
出版信息
Microbiol Resour Announc. 2018 Nov 8;7(18). doi: 10.1128/MRA.01263-18. eCollection 2018 Nov.
Abstract
Isolation of Helicobacter cinaedi from a positive blood culture requires prolonged and stringent subculture conditions. Direct whole-genome sequencing (WGS) of a positive blood culture may provide timely treatment-associated genetic information. Here, we report a draft genome sequence of H. cinaedi compiled by direct WGS, which was 1,995,911 bp in length with 39.1% GC content.
摘要
从阳性血培养物中分离嗜柠檬酸弯曲菌需要长时间且严格的传代培养条件。对阳性血培养物进行直接全基因组测序（WGS）可能会提供与治疗相关的及时遗传信息。在此，我们报告了通过直接WGS汇编的嗜柠檬酸弯曲菌基因组草图序列，其长度为1,995,911 bp，GC含量为39.1%。
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