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从猪外周血白细胞计数变化的转录谱分析揭示了差异基因表达。

Transcriptional Profiling of Leucocyte Count Variation from Porcine Peripheral Blood Reveals Differential Gene Expression.

机构信息

Key Lab of Agricultural Animal Genetics, Breeding, and Reproduction of Ministry of Education, Huazhong Agricultural University, Wuhan 430070, China.

The Cooperative Innovation Center for Sustainable Pig Production, Huazhong Agricultural University, Wuhan 430070, China.

出版信息

Biomed Res Int. 2018 Nov 18;2018:1496536. doi: 10.1155/2018/1496536. eCollection 2018.

Abstract

Leucocytes have tremendous health-check importance related to the individual antiviral capacity of pigs and other mammals. However, the molecular mechanism of the immune response of blood leucocytes in pigs is not completely known. This study investigated the leucocyte-count variation before and after poly I:C stimulation in a Duroc-Erhualian F2 population. Pigs with increased and decreased differences in leucocyte counts were coded as increased responder (IR) and decreased responder (DR), respectively. Then, we used microarray technology to compare the gene-expression profiles of both groups of pigs. Transcriptomic analysis identified 129 differentially expressed genes (DEGs) in IR pigs and 136 DEGs in DR pigs. Forty-one common DEGs showed that both groups had similar expression patterns of immune responses. These results illustrated a differential expression in both groups. Furthermore, qPCR experiment was performed to verify the differential-expression profile. Functional annotation of the DEGs indicated that both IR and DR pigs were similar in several biological processes, including innate immune response, and also exhibited distinct differences in biological processes, molecular function, and pathways. These results provided insights into the mechanism underlying the antiviral capacity of pigs. is CAS Registry Number 24939-03-5.

摘要

白细胞在个体抗病毒能力方面具有重要的健康检查意义,这与猪和其他哺乳动物有关。然而,猪血液白细胞免疫反应的分子机制尚不完全清楚。本研究调查了在杜洛克-二花脸 F2 群体中,聚肌胞苷酸刺激前后白细胞计数的变化。白细胞计数增加和减少差异较大的猪分别被编码为白细胞计数增加反应者(IR)和白细胞计数减少反应者(DR)。然后,我们使用微阵列技术比较了两组猪的基因表达谱。转录组分析在 IR 猪中鉴定出 129 个差异表达基因(DEGs),在 DR 猪中鉴定出 136 个 DEGs。41 个共同的 DEGs 表明两组猪的免疫反应表达模式相似。这些结果表明两组都存在差异表达。此外,还进行了 qPCR 实验来验证差异表达谱。DEGs 的功能注释表明,IR 和 DR 猪在几个生物学过程中具有相似的表达模式,包括先天免疫反应,并且在生物学过程、分子功能和途径方面也表现出明显的差异。这些结果为猪的抗病毒能力机制提供了深入的见解。是 CAS 注册号 24939-03-5。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b96/6276489/f05ab18323ee/BMRI2018-1496536.001.jpg

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