• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

利用支系特异性 PCR 检测方法从环境分离物中鉴定新型腈水解酶基因。

The use of clade-specific PCR assays to identify novel nitrilase genes from environmental isolates.

机构信息

Department of Science, Waterford Institute of Technology, Waterford, Ireland.

Molecular Biotechnology and Biocatalysis Group, Pharmaceutical and Molecular Biotechnology Research Center, Waterford Institute of Technology, Waterford, Ireland.

出版信息

Microbiologyopen. 2019 Apr;8(4):e00700. doi: 10.1002/mbo3.700. Epub 2018 Dec 30.

DOI:10.1002/mbo3.700
PMID:30597773
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6460282/
Abstract

Nitrilase enzymes (EC 3.5.5.1) are responsible for the direct hydration of nitriles to their corresponding carboxylic acids and ammonia. The utilization of nitrilase enzymes in biocatalysis toward bio-pharmaceuticals and industrial applications facilitates the move towards green chemistry. The body of research presented describes a novel clade-specific touchdown PCR protocol for the detection of novel nitrilase genes. The presented study identified partial sequences of 15 novel nitrilase genes across 7 genera, with partial DNA sequence homology (%) displayed across an additional 16 genera. This research will prove valuable in the screening of microorganisms for the identification of novel clade-specific nitrilase genes, with predicted enantioselective profiles as determined by their clade characterizations.

摘要

腈酶(EC 3.5.5.1)负责将腈直接水合为相应的羧酸和氨。在生物制药和工业应用的生物催化中使用腈酶有助于向绿色化学转变。本研究提出了一种新的、特定分支的降落 PCR 检测新的腈酶基因的方法。该研究在 7 个属中鉴定了 15 个新的腈酶基因的部分序列,在另外 16 个属中显示了部分 DNA 序列同源性(%)。这项研究将在筛选微生物以鉴定新的特定分支的腈酶基因方面具有重要价值,根据其分支特征预测其对映选择性谱。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0901/6460282/a5fa9c3b2d5c/MBO3-8-e00700-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0901/6460282/81e2f73ce0b2/MBO3-8-e00700-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0901/6460282/3c964563bfa3/MBO3-8-e00700-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0901/6460282/117783c16e5d/MBO3-8-e00700-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0901/6460282/f53121a78d94/MBO3-8-e00700-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0901/6460282/a5fa9c3b2d5c/MBO3-8-e00700-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0901/6460282/81e2f73ce0b2/MBO3-8-e00700-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0901/6460282/3c964563bfa3/MBO3-8-e00700-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0901/6460282/117783c16e5d/MBO3-8-e00700-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0901/6460282/f53121a78d94/MBO3-8-e00700-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0901/6460282/a5fa9c3b2d5c/MBO3-8-e00700-g005.jpg

相似文献

1
The use of clade-specific PCR assays to identify novel nitrilase genes from environmental isolates.利用支系特异性 PCR 检测方法从环境分离物中鉴定新型腈水解酶基因。
Microbiologyopen. 2019 Apr;8(4):e00700. doi: 10.1002/mbo3.700. Epub 2018 Dec 30.
2
Real-time PCR detection of Fe-type nitrile hydratase genes from environmental isolates suggests horizontal gene transfer between multiple genera.实时 PCR 检测环境分离株中的 Fe 型腈水合酶基因表明多个属之间存在水平基因转移。
Antonie Van Leeuwenhoek. 2010 Nov;98(4):455-63. doi: 10.1007/s10482-010-9459-8. Epub 2010 May 26.
3
Real-time PCR detection of aldoxime dehydratase genes in nitrile-degrading microorganisms.腈降解微生物中醛肟脱水酶基因的实时荧光定量PCR检测
Antonie Van Leeuwenhoek. 2017 Feb;110(2):271-279. doi: 10.1007/s10482-016-0786-2. Epub 2016 Oct 27.
4
Microbial transformation of nitriles to high-value acids or amides.腈类化合物微生物转化为高附加值的酸或酰胺。
Adv Biochem Eng Biotechnol. 2009;113:33-77. doi: 10.1007/10_2008_25.
5
Isolation of identical nitrilase genes from multiple bacterial strains and real-time PCR detection of the genes from soils provides evidence of horizontal gene transfer.从多个细菌菌株中分离出相同的腈水解酶基因,并通过实时 PCR 从土壤中检测到这些基因,为水平基因转移提供了证据。
Arch Microbiol. 2009 Oct;191(10):761-71. doi: 10.1007/s00203-009-0507-6.
6
Nitrile-converting enzymes as a tool to improve biocatalysis in organic synthesis: recent insights and promises.腈转化酶作为改善有机合成中生物催化作用的工具:最新见解与前景
Crit Rev Biotechnol. 2017 Feb;37(1):69-81. doi: 10.3109/07388551.2015.1120704. Epub 2015 Dec 23.
7
Biochemistry and biotechnology of mesophilic and thermophilic nitrile metabolizing enzymes.嗜温及嗜热腈代谢酶的生物化学与生物技术
Extremophiles. 1998 Aug;2(3):207-16. doi: 10.1007/s007920050062.
8
From sequence to function: a new workflow for nitrilase identification.从序列到功能:一种新的腈酶鉴定工作流程。
Appl Microbiol Biotechnol. 2020 Jun;104(11):4957-4970. doi: 10.1007/s00253-020-10544-9. Epub 2020 Apr 14.
9
Novel polymerase chain reaction primers for the specific detection of bacterial copper P-type ATPases gene sequences in environmental isolates and metagenomic DNA.用于在环境分离物和宏基因组 DNA 中特异性检测细菌铜 P 型 ATP 酶基因序列的新型聚合酶链反应引物。
Lett Appl Microbiol. 2010 Jun 1;50(6):552-62. doi: 10.1111/j.1472-765X.2010.02832.x. Epub 2010 Mar 17.
10
Polymerase chain reaction for identification of aldoxime dehydratase in aldoxime- or nitrile-degrading microorganisms.用于鉴定降解醛肟或腈的微生物中醛肟脱水酶的聚合酶链反应
FEMS Microbiol Lett. 2005 May 15;246(2):243-9. doi: 10.1016/j.femsle.2005.04.011.

本文引用的文献

1
Recent advances and challenges in the heterologous production of microbial nitrilases for biocatalytic applications.用于生物催化应用的微生物腈水解酶异源生产的最新进展与挑战
World J Microbiol Biotechnol. 2017 Jan;33(1):8. doi: 10.1007/s11274-016-2173-6. Epub 2016 Nov 17.
2
Real-time PCR detection of aldoxime dehydratase genes in nitrile-degrading microorganisms.腈降解微生物中醛肟脱水酶基因的实时荧光定量PCR检测
Antonie Van Leeuwenhoek. 2017 Feb;110(2):271-279. doi: 10.1007/s10482-016-0786-2. Epub 2016 Oct 27.
3
Bringing nitrilase sequences from databases to life: the search for novel substrate specificities with a focus on dinitriles.
让数据库中的腈水解酶序列焕发生机:寻找以二腈为重点的新型底物特异性。
Appl Microbiol Biotechnol. 2016 Mar;100(5):2193-202. doi: 10.1007/s00253-015-7023-1. Epub 2015 Oct 31.
4
GenBank.GenBank。
Nucleic Acids Res. 2013 Jan;41(Database issue):D36-42. doi: 10.1093/nar/gks1195. Epub 2012 Nov 27.
5
Nitrilases in nitrile biocatalysis: recent progress and forthcoming research.腈水合酶在腈生物催化中的应用:最新进展与未来研究。
Microb Cell Fact. 2012 Oct 30;11:142. doi: 10.1186/1475-2859-11-142.
6
Dendroscope 3: an interactive tool for rooted phylogenetic trees and networks.Dendroscope 3:一个用于有根系统发育树和网络的交互式工具。
Syst Biol. 2012 Dec 1;61(6):1061-7. doi: 10.1093/sysbio/sys062. Epub 2012 Jul 10.
7
Industrial biotransformations in the synthesis of building blocks leading to enantiopure drugs.工业生物转化在构建手性药物砌块中的应用。
Bioresour Technol. 2012 Jul;115:196-207. doi: 10.1016/j.biortech.2011.11.131. Epub 2011 Dec 14.
8
Nitrilase enzymes and their role in plant-microbe interactions.腈酶及其在植物-微生物相互作用中的作用。
Microb Biotechnol. 2009 Jul;2(4):441-51. doi: 10.1111/j.1751-7915.2009.00111.x. Epub 2009 Apr 16.
9
Genome mining for the discovery of new nitrilases in filamentous fungi.从丝状真菌中挖掘基因组以发现新的腈水解酶。
Biotechnol Lett. 2011 Feb;33(2):309-12. doi: 10.1007/s10529-010-0421-7. Epub 2010 Sep 30.
10
Nitrile-containing pharmaceuticals: efficacious roles of the nitrile pharmacophore.含腈类药物:腈药效基团的有效作用
J Med Chem. 2010 Nov 25;53(22):7902-17. doi: 10.1021/jm100762r. Epub 2010 Aug 30.