Lopasteiskaya Ya A, Molchanova E V, Sharov T N, Kuziutina Yu A, Zakharova I B, Victorov D V, Toporkov A V
Klin Lab Diagn. 2016 Aug;61(8):502-7.
The article presents the results of application of developed methodological approach to identifying Burkholderia pseudomallei and Burkholderia mallei using direct mass spectrometry profiling of cellular proteins. The protocol of sampling preparation of cultures of melioidosis and glanders was optimized with taking in account characteristics of observation of requirements of biological safety for operations with pathogenic biological agents of pathogenicity group II. The dependence of quality of mass spectrums (number of individual peaks and their intensity) from medium of fermentation of microorganisms was evaluated. The characteristic mass spectrums of collection strains B.pseudomallei (5) and B.mallei (5) were obtained. The set of reference mass-spectrums was generated for identification data base S.A.R.A.M.I.S.TM (Anagnostec Gmbh.). The mentioned data base was used for identification of 43 strains of pathogenic Burkholderia. The opportunity of reliable identification of taxonomic belonging of examined microorganisms up to species’ level. The cluster analysis of obtained mass-spectrums of common cellular proteins of collection strains of pathogenic Burkholderia demonstrated grouping of examined strains according to their species’ belonging. The supplemented data base of mass-spectral characteristics hereinafter will permit applying express-identification of isolates suspicious for belonging to agents of melioidosis and glanders. The updated data base will become a basis for developing schemes of hemotyping of strains of Burkholderia using mass spectrometry technique.
本文介绍了使用细胞蛋白质直接质谱分析方法鉴定伯克霍尔德菌属假鼻疽杆菌和鼻疽杆菌的应用结果。考虑到在处理II类致病性生物制剂时对生物安全要求的观察特点,优化了类鼻疽和鼻疽培养物的采样制备方案。评估了质谱质量(单个峰的数量及其强度)与微生物发酵培养基的相关性。获得了假鼻疽杆菌(5株)和鼻疽杆菌(5株)标准菌株的特征质谱。为S.A.R.A.M.I.S.TM鉴定数据库(Anagnostec Gmbh.)生成了一组参考质谱。上述数据库用于鉴定43株致病性伯克霍尔德菌。能够可靠地鉴定被检测微生物的分类归属,直至种的水平。对致病性伯克霍尔德菌标准菌株常见细胞蛋白质的质谱进行聚类分析,结果表明被检测菌株根据其种的归属进行了分组。补充后的质谱特征数据库将有助于对疑似类鼻疽和鼻疽病原体的分离株进行快速鉴定。更新后的数据库将成为使用质谱技术制定伯克霍尔德菌菌株血型分型方案的基础。