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高粱GT47家族的全基因组分析揭示了类MUR3基因的功能差异。

Genome-Wide Analysis of Sorghum GT47 Family Reveals Functional Divergences of MUR3-Like Genes.

作者信息

Xu Hua, Ding Anming, Chen Sihui, Marowa Prince, Wang Dian, Chen Min, Hu Ruibo, Kong Yingzhen, O'Neill Malcolm, Chai Guohua, Zhou Gongke

机构信息

Key Laboratory of Biofuels, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China.

Key Laboratory of Tobacco Gene Resources, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao, China.

出版信息

Front Plant Sci. 2018 Dec 14;9:1773. doi: 10.3389/fpls.2018.01773. eCollection 2018.

Abstract

Sorghum () is an important bioenergy crop. Its biomass mainly consists of the cellulosic and non-cellulosic polysaccharides, both which can be converted to biofuels. The biosynthesis of non-cellulosic polysaccharides involves several glycosyltransferases (GT) families including GT47. However, there was no systemic study on GT47 family in sorghum to date. Here, we identified 39 sorghum GT47 family members and showed the functional divergences of MURUS3 (MUR3) homologs. Sorghum GT47 proteins were phylogenetically clustered into four distinct subfamilies. Within each subfamily, gene structure was relatively conserved between the members. Ten gene pairs were identified from the 39 GT47 genes, of which two pairs might be originated from tandem duplication. 25.6% (10/39) of sorghum GT47 genes were homologous to Arabidopsis MUR3, a xyloglucan biosynthesis gene in primary cell walls. , and , three most homologous genes of , exhibited different tissue expression patterns and were selected for complementation into Arabidopsis . Physiological and cell wall analyses showed that SbGT47_2 and SbGT47_7 may be two functional xyloglucan galactosyltransferases in sorghum. Further studies found that MUR3-like genes are widely present in the seed plants but not in the chlorophytic alga . Our results provide novel information for evolutionary analysis and functional dissection of sorghum GT47 family members.

摘要

高粱(Sorghum)是一种重要的生物能源作物。其生物质主要由纤维素和非纤维素多糖组成,这两种多糖均可转化为生物燃料。非纤维素多糖的生物合成涉及包括GT47在内的几个糖基转移酶(GT)家族。然而,迄今为止,尚未对高粱中的GT47家族进行系统研究。在此,我们鉴定了39个高粱GT47家族成员,并展示了MURUS3(MUR3)同源物的功能差异。高粱GT47蛋白在系统发育上聚类为四个不同的亚家族。在每个亚家族中,成员之间的基因结构相对保守。从39个GT47基因中鉴定出10对基因,其中两对可能起源于串联重复。25.6%(10/39)的高粱GT47基因与拟南芥MUR3同源,MUR3是一种在初生细胞壁中参与木葡聚糖生物合成的基因。SbGT47_2、SbGT47_7和SbGT47_10是与MUR3最同源的三个基因,它们表现出不同的组织表达模式,并被选择用于转化拟南芥进行互补实验。生理和细胞壁分析表明,SbGT47_2和SbGT47_7可能是高粱中两种功能性木葡聚糖半乳糖基转移酶。进一步研究发现,类MUR3基因广泛存在于种子植物中,但不存在于绿藻中。我们的研究结果为高粱GT47家族成员的进化分析和功能解析提供了新的信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f94/6302003/0ebc6ab55867/fpls-09-01773-g001.jpg

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