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后生动物中新型血蓝蛋白样基因的发现

Discovery of Novel Hemocyanin-Like Genes in Metazoans.

作者信息

Costa-Paiva Elisa M, Schrago Carlos G, Coates Christopher J, Halanych Kenneth M

出版信息

Biol Bull. 2018 Dec;235(3):134-151. doi: 10.1086/700181. Epub 2018 Nov 5.

DOI:10.1086/700181
PMID:30624121
Abstract

Among animals, two major groups of oxygen-binding proteins are found: proteins that use iron to bind oxygen (hemoglobins and hemerythrins) and two non-homologous hemocyanins that use copper. Although arthropod and mollusc hemocyanins bind oxygen in the same manner, they are distinct in their molecular structures. In order to better understand the range of natural variation in hemocyanins, we searched for them in a diverse array of metazoan transcriptomes by using bioinformatics tools to examine hemocyanin evolutionary history and to consequently revive the discussion about whether all metazoan hemocyanins shared a common origin with frequent losses or whether they originated separately after the divergence of Lophotrochozoa and Ecdysozoa. We confirm that the distribution of hemocyanin-like genes is more widespread than previously reported, including five putative novel mollusc hemocyanin genes in two annelid species from Chaetopteridae. For arthropod hemocyanins, 16 putative novel genes were retained, and the presence of arthropod hemocyanins in 11 annelid species represents a novel observation. Interestingly, Annelida is the lineage that presents the greatest repertoire of oxygen transport proteins reported to date, possessing all the main superfamily proteins, which could be explained partially by the immense variability of lifestyles and habitats. Work presented here contradicts the canonical view that hemocyanins are restricted to molluscs and arthropods, suggesting that the occurrence of copper-based blood pigments in metazoans has been underestimated. Our results also support the idea of the presence of oxygen carrier hemocyanins being widespread across metazoans with an evolutionary history characterized by frequent losses.

摘要

在动物中,发现了两大类氧结合蛋白:利用铁结合氧的蛋白(血红蛋白和血绿蛋白)以及两类利用铜的非同源血蓝蛋白。尽管节肢动物和软体动物的血蓝蛋白以相同方式结合氧,但它们的分子结构却截然不同。为了更好地理解血蓝蛋白自然变异的范围,我们通过使用生物信息学工具在各种后生动物转录组中搜索血蓝蛋白,以研究其进化历史,并由此重新引发关于所有后生动物血蓝蛋白是具有共同起源且频繁丢失,还是在冠轮动物和蜕皮动物分化后分别起源的讨论。我们证实,血蓝蛋白样基因的分布比先前报道的更为广泛,包括在来自毛翼虫科的两种环节动物物种中发现的五个推定的新型软体动物血蓝蛋白基因。对于节肢动物血蓝蛋白,保留了16个推定的新基因,并且在11种环节动物物种中发现节肢动物血蓝蛋白是一个新的观察结果。有趣的是,环节动物是迄今为止报道的氧运输蛋白种类最多的谱系,拥有所有主要的超家族蛋白,这可以部分地由其生活方式和栖息地的巨大变异性来解释。本文所呈现的研究结果与血蓝蛋白仅限于软体动物和节肢动物的传统观点相矛盾,这表明后生动物中基于铜的血色素的存在被低估了。我们的结果还支持这样一种观点,即氧载体血蓝蛋白广泛存在于后生动物中,其进化历史的特点是频繁丢失。

相似文献

1
Discovery of Novel Hemocyanin-Like Genes in Metazoans.后生动物中新型血蓝蛋白样基因的发现
Biol Bull. 2018 Dec;235(3):134-151. doi: 10.1086/700181. Epub 2018 Nov 5.
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Molecular evolution of the arthropod hemocyanin superfamily.节肢动物血蓝蛋白超家族的分子进化
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The diversity and evolution of chelicerate hemocyanins.蛛形纲血蓝蛋白的多样性和进化。
BMC Evol Biol. 2012 Feb 14;12:19. doi: 10.1186/1471-2148-12-19.
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Putative phenoloxidases in the tunicate Ciona intestinalis and the origin of the arthropod hemocyanin superfamily.海鞘Ciona intestinalis中的推定酚氧化酶与节肢动物血蓝蛋白超家族的起源
J Comp Physiol B. 2004 Mar;174(2):169-80. doi: 10.1007/s00360-003-0402-4. Epub 2003 Dec 11.
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Disulfide bond reduction: A powerful, chemical probe for the study of structure-function relationships in the hemocyanins.二硫键还原:一种用于研究血蓝蛋白结构-功能关系的强大化学探针。
Arch Biochem Biophys. 1999 Sep 15;369(2):261-6. doi: 10.1006/abbi.1999.1367.
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A broad genomic survey reveals multiple origins and frequent losses in the evolution of respiratory hemerythrins and hemocyanins.广泛的基因组调查揭示了呼吸血蓝蛋白和血蓝蛋白进化中的多种起源和频繁丢失。
Genome Biol Evol. 2013;5(7):1435-42. doi: 10.1093/gbe/evt102.
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The structure of arthropod hemocyanins.节肢动物血蓝蛋白的结构。
Science. 1985 Aug 9;229(4713):519-24. doi: 10.1126/science.4023698.
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Common origin of arthropod tyrosinase, arthropod hemocyanin, insect hexamerin, and dipteran arylphorin receptor.节肢动物酪氨酸酶、节肢动物血蓝蛋白、昆虫六聚蛋白和双翅目芳基蛋白受体的共同起源。
J Mol Evol. 1996 Jun;42(6):713-28. doi: 10.1007/BF02338804.
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Evolution of arthropod hemocyanins and insect storage proteins (hexamerins).节肢动物血蓝蛋白和昆虫储存蛋白(六聚蛋白)的进化
Mol Biol Evol. 1994 May;11(3):493-503. doi: 10.1093/oxfordjournals.molbev.a040129.

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