Departamento de Ciencia y Tecnología, Consejo Nacional de Investigaciones Científicas y Técnicas , Universidad Nacional de Quilmes , Sáenz Peña 352 , Bernal B1876BXD , Argentina.
J Phys Chem B. 2019 Feb 7;123(5):1017-1025. doi: 10.1021/acs.jpcb.8b10249. Epub 2019 Jan 24.
P2X receptors are a group of trimeric cationic channels that are activated by adenosine 5'-triphosphate. They perform critical roles in the membranes of mammalian cells, and their improper functioning is associated with numerous diseases. Despite the vast amount of research devoted to them, several aspects of their operation are currently unclear, including the causes of their charge selectivity. We present the results of molecular dynamics simulation, which shed light on this issue for the case of P2X channels. We examined in detail the behavior of Na and Cl ions inside the receptor. The examination reveals that charge discrimination occurs in two stages. First, cations bear precedence over anions to enter the extracellular vestibule. Then, cations at the extracellular vestibule are more likely to cross the pore than anions in an equivalent position. In this manner, a thorough but straightforward analysis of computational simulations suggests a stepwise mechanism, without a unique determinant factor.
P2X 受体是一组由三磷酸腺苷激活的三聚阳离子通道。它们在哺乳动物细胞的膜中发挥着关键作用,其功能异常与许多疾病有关。尽管人们对它们进行了大量的研究,但它们的某些作用机制目前仍不清楚,包括其电荷选择性的原因。我们呈现了分子动力学模拟的结果,这些结果为 P2X 通道的情况提供了对此问题的深入了解。我们详细研究了 Na 和 Cl 离子在受体内部的行为。研究表明,电荷区分发生在两个阶段。首先,阳离子优先于阴离子进入细胞外前庭。然后,在细胞外前庭的阳离子比处于相同位置的阴离子更有可能穿过孔。通过这种方式,对计算模拟的彻底但直接的分析表明了一种分步机制,而没有唯一的决定因素。