Neurogenetics Research Group, Instituto de Investigación Sanitaria, Santiago de Compostela, Spain.
Insititute of Medical Genetics and Applied Genomics, Tübingen University, Tübingen, Germany.
Orphanet J Rare Dis. 2019 Jan 21;14(1):20. doi: 10.1186/s13023-018-0985-1.
Rare and ultra-rare diseases (URDs) are often chronic and life-threatening conditions that have a profound impact on sufferers and their families, but many are notoriously difficult to detect. Niemann-Pick disease type C (NP-C) serves to illustrate the challenges, benefits and pitfalls associated with screening for ultra-rare inborn errors of metabolism (IEMs). A comprehensive, non-systematic review of published information from NP-C screening studies was conducted, focusing on diagnostic methods and study designs that have been employed to date. As a key part of this analysis, data from both successful studies (where cases were positively identified) and unsuccessful studies (where the chosen approach failed to identify any cases) were included alongside information from our own experiences gained from the planning and execution of screening for NP-C. On this basis, best-practice recommendations for ultra-rare IEM screening are provided. Twenty-six published screening studies were identified and categorised according to study design into four groups: 1) prospective patient cohort and family-based secondary screenings (18 studies); 2) analyses of archived 'biobank' materials (one study); 3) medical chart review and bioinformatics data mining (five studies); and 4) newborn screening (two studies). NPC1/NPC2 sequencing was the most common primary screening method (Sanger sequencing in eight studies and next-generation sequencing [gene panel or exome sequencing] in five studies), followed by biomarker analyses (usually oxysterols) and clinical surveillance.
Historically, screening for NP-C has been based on single-patient studies, small case series, and targeted cohorts, but the emergence of new diagnostic methods over the last 5-10 years has provided opportunities to screen for NP-C on a larger scale. Combining clinical, biomarker and genetic diagnostic methods represents the most effective way to identify NP-C cases, while reducing the likelihood of misdiagnosis. Our recommendations are intended as a guide for planning screening protocols for ultra-rare IEMs in general.
罕见病和超罕见病(URD)通常是慢性且危及生命的疾病,对患者及其家庭造成深远影响,但许多疾病的诊断极具挑战性。尼曼-匹克病 C 型(NP-C)可说明针对超罕见先天性代谢缺陷(IEM)进行筛查所面临的挑战、获益和陷阱。本研究对 NP-C 筛查研究的已发表信息进行了全面的非系统性综述,重点关注了迄今为止所采用的诊断方法和研究设计。作为该分析的关键部分,纳入了成功研究(其中病例得到了明确识别)和不成功研究(所选方法未能识别任何病例)的数据,以及我们从 NP-C 筛查的规划和实施中获得的自身经验信息。在此基础上,为超罕见 IEM 筛查提供了最佳实践建议。共确定了 26 项已发表的筛查研究,并根据研究设计分为四组进行分类:1)前瞻性患者队列和基于家族的二次筛查(18 项研究);2)存档“生物库”材料分析(一项研究);3)病历审查和生物信息学数据挖掘(五项研究);4)新生儿筛查(两项研究)。NPC1/NPC2 测序是最常见的一线筛查方法(八项研究中为 Sanger 测序,五项研究中为下一代测序[基因组合或外显子组测序]),其次是生物标志物分析(通常为氧化固醇)和临床监测。
从历史上看,NP-C 的筛查基于单患者研究、小病例系列和靶向队列,但过去 5-10 年来新诊断方法的出现为更大规模的 NP-C 筛查提供了机会。结合临床、生物标志物和遗传诊断方法是识别 NP-C 病例的最有效方法,同时降低误诊的可能性。我们的建议旨在为一般超罕见 IEM 筛查方案的规划提供指导。