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比较分析不同耐盐性突尼斯大麦地方品种的白蛋白/球蛋白谷蛋白蛋白组部分,揭示了特定基因型和丰富的定义蛋白。

Comparative analyses of albumin/globulin grain proteome fraction in differentially salt-tolerant Tunisian barley landraces reveals genotype-specific and defined abundant proteins.

机构信息

Laboratory of Plant Molecular Physiology, Biotechnology Center of Borj Cedria, Hammam-Lif, Tunisia.

Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany.

出版信息

Plant Biol (Stuttg). 2019 Jul;21(4):652-661. doi: 10.1111/plb.12965. Epub 2019 Feb 19.

Abstract

Salinity is one of the major abiotic stresses threatening crop production and yield worldwide. Breeding programmes are therefore needed to improve yield under cultivation in soil. Traits from locally adopted landraces provide a resource to assist breeding of novel elite genotypes. Here, we examine differentially expressed proteins by performing comparative proteomic profiling of the albumin/globulin grain fraction of Tunisian barley genotype landraces with contrasting salinity tolerance. Tunisian barley Boulifa (B, tolerant) and Testour (T, sensitive) mature grains were assessed in 2-DE profiles. Differentially expressed spots, with an abundance enhanced 1.5-fold in the grain, were subjected to MALDI TOF/TOF MS for identification. Distinctiveness between tolerant and sensitive genotypes was proved in the albumin/globulin fraction using PCA; 64 spots showed significant differential abundance. Increased accumulation of 40 spots was confirmed in Boulifa with, interestingly, four genotype-specific spots. Two of these four spots were sHSP. Proteins with highest abundance were serpin Z7, 16.9 KDa Class I HSP and phosphogluconolactonase 2. Proteins such as expansin, kiwellin, kinesin and succinyl-CoA ligase were identified for the first time in barley grain. Moreover, ß-amylase, LEA family and others were identified as abundant in Boulifa. On the other hand, proteins more accumulated in Testour are implicated mainly in ROS scavenging and protease inhibition. Our results clearly indicate proteomic contrast between the two selected genotypes. With identification of specific HSP, high abundant stress-protective and other defined proteins, we provide biochemical traits that will support breeding programmes to address the threat of salinity in agricultural production.

摘要

盐度是威胁全球作物生产和产量的主要非生物胁迫之一。因此,需要开展育种计划,以提高在土壤中种植条件下的产量。来自当地采用的地方品种的特性为协助培育新型优良基因型提供了资源。在这里,我们通过对具有不同耐盐性的突尼斯大麦基因型地方品种的白蛋白/球蛋白谷粒部分进行比较蛋白质组学分析,研究了差异表达的蛋白质。在 2-DE 图谱中评估了突尼斯大麦 Boulifa(B,耐盐)和 Testour(T,敏感)成熟谷物。差异表达的斑点,其在谷物中的丰度增强了 1.5 倍,通过 MALDI TOF/TOF MS 进行鉴定。PCA 证明了耐盐和敏感基因型在白蛋白/球蛋白部分之间的独特性;64 个斑点表现出显著的差异丰度。有趣的是,在 Boulifa 中,40 个斑点的积累增加了,其中有四个是特定于基因型的斑点。这四个斑点中的两个是 sHSP。具有最高丰度的蛋白质是丝氨酸蛋白酶抑制剂 Z7、16.9 kDa I 类 HSP 和磷酸葡萄糖酸内酯酶 2。首次在大麦籽粒中鉴定到扩展蛋白、kiwellin、驱动蛋白和琥珀酰辅酶 A 连接酶等蛋白质。此外,在 Boulifa 中还鉴定到了β-淀粉酶、LEA 家族等丰富的蛋白质。另一方面,在 Testour 中积累更多的蛋白质主要与 ROS 清除和蛋白酶抑制有关。我们的研究结果清楚地表明了这两个所选基因型之间的蛋白质组学差异。通过鉴定特定的 HSP、高丰度的应激保护和其他定义明确的蛋白质,我们提供了支持应对农业生产中盐胁迫的育种计划的生化特征。

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