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2-氨基噻唑衍生物作为蛋白激酶 CK2 的选择性别构调节剂。1. 别构结合位点的鉴定。

2-Aminothiazole Derivatives as Selective Allosteric Modulators of the Protein Kinase CK2. 1. Identification of an Allosteric Binding Site.

机构信息

Pharmaceutical and Medicinal Chemistry , Saarland University , Campus C2.3, 66123 Saarbrücken , Germany.

Université de Lyon, Université Lyon 1, Faculté de Pharmacie, ISPB, EA 4446 Bioactive Molecules and Medicinal Chemistry, SFR Santé Lyon-Est CNRS UMS3453, INSERM US7, F-69373 , Lyon Cedex 08, France.

出版信息

J Med Chem. 2019 Feb 28;62(4):1803-1816. doi: 10.1021/acs.jmedchem.8b01766. Epub 2019 Feb 18.

Abstract

CK2 is a ubiquitous Ser/Thr protein kinase involved in the control of various signaling pathways and is known to be constitutively active. In the present study, we identified aryl 2-aminothiazoles as a novel class of CK2 inhibitors, which displayed a non-ATP-competitive mode of action and stabilized an inactive conformation of CK2 in solution. Enzyme kinetics studies, STD NMR, circular dichroism spectroscopy, and native mass spectrometry experiments demonstrated that the compounds bind in an allosteric pocket outside the ATP-binding site. Our data, combined with molecular docking studies, strongly suggested that this new binding site was located at the interface between the αC helix and the flexible glycine-rich loop. A first hit optimization led to compound 7, exhibiting an IC of 3.4 μM against purified CK2α in combination with a favorable selectivity profile. Thus, we identified a novel class of CK2 inhibitors targeting an allosteric pocket, offering great potential for further optimization into anticancer drugs.

摘要

CK2 是一种普遍存在的丝氨酸/苏氨酸蛋白激酶,参与多种信号通路的调控,且已知其处于持续激活状态。在本研究中,我们鉴定出芳基 2-氨基噻唑是一种新型的 CK2 抑制剂,其表现出非 ATP 竞争性作用模式,并在溶液中稳定 CK2 的非活性构象。酶动力学研究、STD NMR、圆二色性光谱和天然质谱实验表明,这些化合物结合在 ATP 结合位点之外的别构口袋中。我们的数据与分子对接研究相结合,强烈表明这个新的结合位点位于 αC 螺旋和柔性甘氨酸丰富环之间的界面上。首次命中优化得到了化合物 7,其对纯化的 CK2α 的 IC 为 3.4 μM,同时具有良好的选择性特征。因此,我们鉴定出了一类新型的靶向别构口袋的 CK2 抑制剂,为进一步优化为抗癌药物提供了巨大的潜力。

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本文引用的文献

1
Second-generation CK2α inhibitors targeting the αD pocket.
Chem Sci. 2018 Feb 20;9(11):3041-3049. doi: 10.1039/c7sc05122k. eCollection 2018 Mar 21.
2
Conformational dynamics of human protein kinase CK2α and its effect on function and inhibition.
Proteins. 2018 Mar;86(3):344-353. doi: 10.1002/prot.25444. Epub 2017 Dec 25.
3
Development of Selective Clk1 and -4 Inhibitors for Cellular Depletion of Cancer-Relevant Proteins.
J Med Chem. 2017 Jul 13;60(13):5377-5391. doi: 10.1021/acs.jmedchem.6b01915. Epub 2017 May 31.
4
A fragment-based approach leading to the discovery of a novel binding site and the selective CK2 inhibitor CAM4066.
Bioorg Med Chem. 2017 Jul 1;25(13):3471-3482. doi: 10.1016/j.bmc.2017.04.037. Epub 2017 Apr 30.
5
Specific inhibition of CK2α from an anchor outside the active site.
Chem Sci. 2016 Nov 1;7(11):6839-6845. doi: 10.1039/c6sc02335e. Epub 2016 Jul 12.
6
A chemical with proven clinical safety rescues Down-syndrome-related phenotypes in through DYRK1A inhibition.
Dis Model Mech. 2016 Aug 1;9(8):839-48. doi: 10.1242/dmm.025668. Epub 2016 Jul 7.
7
Structure-activity relationship study of 4-(thiazol-5-yl)benzoic acid derivatives as potent protein kinase CK2 inhibitors.
Bioorg Med Chem. 2016 Mar 1;24(5):1136-41. doi: 10.1016/j.bmc.2016.01.043. Epub 2016 Jan 22.
8
Design, validation and efficacy of bisubstrate inhibitors specifically affecting ecto-CK2 kinase activity.
Biochem J. 2015 Nov 1;471(3):415-30. doi: 10.1042/BJ20141127. Epub 2015 Sep 8.
10
Identification of a novel function of CX-4945 as a splicing regulator.
PLoS One. 2014 Apr 17;9(4):e94978. doi: 10.1371/journal.pone.0094978. eCollection 2014.

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