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基于高光谱成像的感染大麦叶片早期检测及病斑可视化

Early Detection of -Infected Barley Leaves and Lesion Visualization Based on Hyperspectral Imaging.

作者信息

Zhou Rui-Qing, Jin Juan-Juan, Li Qing-Mian, Su Zhen-Zhu, Yu Xin-Jie, Tang Yu, Luo Shao-Ming, He Yong, Li Xiao-Li

机构信息

College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, China.

Zhejiang Machinery Industry Information Institute, Hangzhou, China.

出版信息

Front Plant Sci. 2019 Jan 15;9:1962. doi: 10.3389/fpls.2018.01962. eCollection 2018.

Abstract

Early detection of foliar diseases is vital to the management of plant disease, since these pathogens hinder crop productivity worldwide. This research applied hyperspectral imaging (HSI) technology to early detection of -infected barley leaves at four consecutive infection periods. The averaged spectra were used to identify the infection periods of the samples. Additionally, principal component analysis (PCA), spectral unmixing analysis and spectral angle mapping (SAM) were adopted to locate the lesion sites. The results indicated that linear discriminant analysis (LDA) coupled with competitive adaptive reweighted sampling (CARS) achieved over 98% classification accuracy and successfully identified the infected samples 24 h after inoculation. Importantly, spectral unmixing analysis was able to reveal the lesion regions within 24 h after inoculation, and the resulting visualization of host-pathogen interactions was interpretable. Therefore, HSI combined with analysis by those methods would be a promising tool for both early infection period identification and lesion visualization, which would greatly improve plant disease management.

摘要

早期检测叶部病害对于植物病害管理至关重要,因为这些病原体在全球范围内阻碍作物生产力。本研究将高光谱成像(HSI)技术应用于连续四个感染时期对感染大麦叶片的早期检测。利用平均光谱来识别样本的感染时期。此外,采用主成分分析(PCA)、光谱分解分析和光谱角映射(SAM)来定位病变部位。结果表明,线性判别分析(LDA)与竞争性自适应重加权采样(CARS)相结合,分类准确率超过98%,并在接种后24小时成功识别出感染样本。重要的是,光谱分解分析能够在接种后24小时内揭示病变区域,并且由此产生的宿主-病原体相互作用可视化结果是可解释的。因此,HSI与这些方法相结合将成为早期感染时期识别和病变可视化的一个有前景的工具,这将极大地改善植物病害管理。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/80df/6341029/9f1a4014fee1/fpls-09-01962-g001.jpg

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