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非核糖体肽合成酶 Ebony 编码一个非典型的缩合结构域。

nonribosomal peptide synthetase Ebony encodes an atypical condensation domain.

机构信息

The Monash Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia;

Department of Biochemistry and Molecular Biology, Monash University, Clayton, VIC 3800, Australia.

出版信息

Proc Natl Acad Sci U S A. 2019 Feb 19;116(8):2913-2918. doi: 10.1073/pnas.1811194116. Epub 2019 Jan 31.

Abstract

The protein Ebony from plays a central role in the regulation of histamine and dopamine in various tissues through condensation of these amines with β-alanine. Ebony is a rare example of a nonribosomal peptide synthetase (NRPS) from a higher eukaryote and contains a C-terminal sequence that does not correspond to any previously characterized NRPS domain. We have structurally characterized this C-terminal domain and have discovered that it adopts the aryl-alkylamine--acetyl transferase (AANAT) fold, which is unprecedented in NRPS biology. Through analysis of ligand-bound structures, activity assays, and binding measurements, we have determined how this atypical condensation domain is able to provide selectivity for both the carrier protein-bound amino acid and the amine substrates, a situation that remains unclear for standard condensation domains identified to date from NRPS assembly lines. These results demonstrate that the C terminus of Ebony encodes a eukaryotic example of an alternative type of NRPS condensation domain; they also illustrate how the catalytic components of such assembly lines are significantly more diverse than a minimal set of conserved functional domains.

摘要

来自 的 Ebony 蛋白通过与 β-丙氨酸缩合,在各种组织中对组胺和多巴胺的调节中发挥核心作用。Ebony 是高等真核生物中非核糖体肽合成酶 (NRPS) 的罕见例子,它包含一个与任何以前表征的 NRPS 结构域都不对应的 C 末端序列。我们已经对这个 C 末端结构域进行了结构表征,并发现它采用了芳基-烷基胺-乙酰基转移酶 (AANAT) 折叠,这在 NRPS 生物学中是前所未有的。通过配体结合结构分析、活性测定和结合测量,我们确定了这个非典型缩合结构域如何能够为结合蛋白的氨基酸和胺底物提供选择性,这种情况对于迄今为止从 NRPS 装配线上鉴定的标准缩合结构域仍然不清楚。这些结果表明,Ebony 的 C 端编码了一种替代类型的 NRPS 缩合结构域的真核范例;它们还说明了这些装配线的催化组件比一组最小的保守功能结构域具有更大的多样性。

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