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从智利中部金特罗湾原油污染沉积物中分离出的海洋烃降解菌水生产碱菌QD168的全基因组序列

Complete Genome Sequence of the Marine Hydrocarbon Degrader Alcaligenes aquatilis QD168, Isolated from Crude Oil-Polluted Sediment of Quintero Bay, Central Chile.

作者信息

Durán Roberto E, Barra-Sanhueza Bárbara, Salvà-Serra Francisco, Méndez Valentina, Jaén-Luchoro Daniel, Moore Edward R B, Seeger Michael

机构信息

Molecular Microbiology and Environmental Biotechnology Laboratory, Department of Chemistry & Centro de Biotecnología Daniel Alkalay Lowitt, Universidad Técnica Federico Santa María, Valparaíso, Chile.

Department of Infectious Diseases, Institute for Biomedicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.

出版信息

Microbiol Resour Announc. 2019 Jan 31;8(5). doi: 10.1128/MRA.01664-18. eCollection 2019 Jan.

DOI:10.1128/MRA.01664-18
PMID:30714040
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6357646/
Abstract

Alcaligenes aquatilis strain QD168 (= CCUG 69566) is a marine hydrocarbon-degrading bacterium isolated from crude oil-polluted sediment from Quintero Bay, Central Chile. Here, we present the 4.32-Mb complete genome sequence of strain QD168, with 3,892 coding sequences, 58 tRNAs, and a 56.3% G+C content.

摘要

水生产碱菌菌株QD168(= CCUG 69566)是一种从智利中部金特罗湾受原油污染的沉积物中分离出的海洋烃降解细菌。在此,我们展示了菌株QD168的432万个碱基对的完整基因组序列,其中有3892个编码序列、58个转运RNA,以及56.3%的鸟嘌呤与胞嘧啶含量。

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3
CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database.CARD 2017:全面抗生素抗性数据库的扩展及以模型为中心的管理
Nucleic Acids Res. 2017 Jan 4;45(D1):D566-D573. doi: 10.1093/nar/gkw1004. Epub 2016 Oct 26.
4
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
5
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Bioinformatics. 2016 Mar 15;32(6):929-31. doi: 10.1093/bioinformatics/btv681. Epub 2015 Nov 16.
6
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J Environ Sci (China). 2013 Nov 1;25(11):2257-64. doi: 10.1016/s1001-0742(12)60288-5.
7
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Genome Announc. 2014 Jan 9;2(1):e01149-13. doi: 10.1128/genomeA.01149-13.
8
Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data.非杂交、基于长读长 SMRT 测序数据的完成微生物基因组组装。
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9
Clustal W and Clustal X version 2.0.Clustal W和Clustal X 2.0版本
Bioinformatics. 2007 Nov 1;23(21):2947-8. doi: 10.1093/bioinformatics/btm404. Epub 2007 Sep 10.
10
Biodegradation of phenol at high initial concentration by Alcaligenes faecalis.粪产碱菌对高初始浓度苯酚的生物降解作用
J Hazard Mater. 2007 Aug 17;147(1-2):672-6. doi: 10.1016/j.jhazmat.2007.05.031. Epub 2007 May 16.