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分析 TNF-α诱导牙髓干细胞成骨分化过程中长链非编码 RNA 的改变。

Profiling lncRNA alterations during TNF‑α induced osteogenic differentiation of dental pulp stem cells.

机构信息

First Affiliated Hospital of Soochow University, Suzhou, Jiangsu 215006, P.R. China.

Department of Orthopedics, Affiliated Hospital of Nantong University, Nantong, Jiangsu 226001, P.R. China.

出版信息

Mol Med Rep. 2019 Apr;19(4):2831-2836. doi: 10.3892/mmr.2019.9894. Epub 2019 Jan 24.

DOI:10.3892/mmr.2019.9894
PMID:30720070
Abstract

The multipotent and easily accessible characteristics of dental pulp stem cells (DPSCs) make them a promising target for bone tissue engineering. Long non‑coding RNAs (lncRNAs) have an important role in the osteogenic differentiation of mesenchymal stem cells. Nevertheless, whether lncRNAs are involved in the osteogenic differentiation of DPSCs remains unclear. The present study examined the expression alterations of lncRNAs in tumor necrosis factor‑α induced osteogenic differentiation of DPSCs. Following identification of differentially expressed lncRNAs at different time points by reverse transcription‑quantitative polymerase chain reaction, profiling analysis was performed and a profile was further validated, in which lncRNA expression levels demonstrated significant upregulation. The next generation sequencing analysis identified 77 (58 upregulated and 19 downregulated) and 133 differentially expressed lncRNAs (73 upregulated and 60 downregulated) at 7 and 14 days post‑treatment, respectively. In addition, 34 lncRNAs were predicted to be strongly associated with 336 mRNA transcripts that underwent significant alterations during osteogenic differentiation. The present data demonstrated that one lncRNA, X inactive specific transcript, is essential for efficient osteogenic differentiation of DPSCs by alkaline phosphatase staining. In summary, the present findings provide insight for the understanding of how non‑coding RNAs are involved in regulating the osteogenic differentiation of DPSCs, which may further advance the translational studies of bone tissue engineering.

摘要

牙髓干细胞(DPSCs)具有多能性和易于获取的特点,使其成为骨组织工程的有前途的靶标。长非编码 RNA(lncRNA)在间充质干细胞的成骨分化中具有重要作用。然而,lncRNA 是否参与 DPSCs 的成骨分化尚不清楚。本研究探讨了 lncRNA 在肿瘤坏死因子-α诱导的 DPSCs 成骨分化中的表达变化。通过逆转录-定量聚合酶链反应在不同时间点鉴定差异表达的 lncRNA 后,进行了分析谱分析,并进一步验证了一个谱,其中 lncRNA 表达水平显示出明显的上调。下一代测序分析分别在处理后 7 和 14 天鉴定出 77(58 个上调和 19 个下调)和 133 个差异表达的 lncRNA(73 个上调和 60 个下调)。此外,34 个 lncRNA 被预测与 336 个在成骨分化过程中发生显著变化的 mRNA 转录物强烈相关。本数据表明,一个 lncRNA,X 失活特异性转录物,通过碱性磷酸酶染色对 DPSCs 的有效成骨分化是必不可少的。总之,本研究结果为理解非编码 RNA 如何参与调节 DPSCs 的成骨分化提供了新的认识,这可能进一步推进骨组织工程的转化研究。

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引用本文的文献

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Mesenchymal Stem Cell-Derived from Dental Tissues-Related lncRNAs: A New Regulator in Osteogenic Differentiation.源自牙组织的间充质干细胞相关长链非编码RNA:成骨分化中的新型调节因子
J Tissue Eng Regen Med. 2023 Jul 4;2023:4622584. doi: 10.1155/2023/4622584. eCollection 2023.
2
Epigenetic regulation of dental pulp stem cells and its potential in regenerative endodontics.牙髓干细胞的表观遗传调控及其在牙髓再生中的潜力。
World J Stem Cells. 2021 Nov 26;13(11):1647-1666. doi: 10.4252/wjsc.v13.i11.1647.
3
Multidifferentiation potential of dental-derived stem cells.
牙源性干细胞的多向分化潜能。
World J Stem Cells. 2021 May 26;13(5):342-365. doi: 10.4252/wjsc.v13.i5.342.
4
Epigenetic Regulation of Dental Pulp Stem Cell Fate.牙髓干细胞命运的表观遗传调控
Stem Cells Int. 2020 Oct 13;2020:8876265. doi: 10.1155/2020/8876265. eCollection 2020.