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加拿大不列颠哥伦比亚省埃普索米克巴斯克湖细菌群落的培养与表征

Cultivation and characterization of the bacterial assemblage of epsomic Basque Lake, BC.

作者信息

Crisler James D, Chen Fei, Clark Benton C, Schneegurt Mark A

机构信息

Department of Biological Sciences, Wichita State University, 26, 1845 Fairmount, Wichita, KS, 67260, USA.

Planetary Protection Group, Jet Propulsion Laboratory, NASA, Pasadena, CA, USA.

出版信息

Antonie Van Leeuwenhoek. 2019 Jul;112(7):1105-1119. doi: 10.1007/s10482-019-01244-0. Epub 2019 Feb 8.

Abstract

Athalassohaline waters that are rich in divalent ions are good analogues for the chemical environments of Mars and the ocean worlds. Sulfate salts, along with chlorides, are important in Mars regolith with Ca, Fe, Mg, and Na counterions. Certain lakes in the Pacific Northwest are saturated with MgSO as epsomite. Here we report on the microbial community of Basque Lake, BC, a group of playas that is saturated with MgSO. More than 60 bacterial isolates were obtained from Basque Lake soils by enrichment culture and repetitive streak-plating using media containing 10% (~ 1.7 M) NaCl or 50% (~ 2 M) MgSO. Most of the isolates (~ 75%) were Gram-positive, motile, and produced endospores. Isolates related to Marinococcus halophilus and Virgibacillus marismortui dominated the collection. Halomonas and Salinivibrio were Gram-negative genera found at Basque Lake. Nearly all of the Basque Lake isolates grew at 50% MgSO, with 65% growing at 60% MgSO. Several isolates could grow in saturated (67%) MgSO (a = 0.90). All of the isolates grew at 10% NaCl with 70% growing at 20% salinity (~ 3.5 M NaCl; a = 0.82). Basque Lake isolates grew better at basic pH than acidic pH, with 80% growing at pH 9 and 30% growing at pH 10. Only 20% of the isolates grew at pH 5. Numerical taxonomy dendrograms based on 44 phenetic characteristics showed a strong correspondence to phylogenetic trees constructed from 16S rRNA gene sequences. Pyrosequencing of 16S rRNA gene sequences from direct DNA extracts of Basque Lake soils recovered predominantly Proteobacteria (60%), Firmicutes (11%), and unclassified bacteria (27%). Microbes capable of growth under the extreme chemical conditions of Mars are a particular concern for forward planetary protection should they contaminate a spacecraft.

摘要

富含二价离子的贫盐海水是火星和海洋世界化学环境的良好模拟物。硫酸盐与氯化物一起,在火星风化层中很重要,其中钙、铁、镁和钠为抗衡离子。太平洋西北地区的某些湖泊以泻利盐的形式被硫酸镁饱和。在此,我们报告了加拿大不列颠哥伦比亚省巴斯克湖的微生物群落,这是一组被硫酸镁饱和的盐滩。通过富集培养和使用含有10%(约1.7M)氯化钠或50%(约2M)硫酸镁的培养基进行重复划线平板培养,从巴斯克湖土壤中获得了60多种细菌分离株。大多数分离株(约75%)为革兰氏阳性、能动且产生芽孢。与嗜盐海球菌和死海芽孢杆菌相关的分离株在该集合中占主导地位。嗜盐单胞菌属和盐弧菌属是在巴斯克湖发现的革兰氏阴性菌属。几乎所有巴斯克湖分离株都能在50%硫酸镁中生长,65%能在60%硫酸镁中生长。有几种分离株能在饱和(67%)硫酸镁(水活度a = 0.90)中生长。所有分离株都能在10%氯化钠中生长,70%能在20%盐度(约3.5M氯化钠;a = 0.82)中生长。巴斯克湖分离株在碱性pH条件下比酸性pH条件下生长得更好,80%在pH 9时生长,30%在pH 10时生长。只有20%的分离株在pH 5时生长。基于44个表型特征的数值分类树状图与根据16S rRNA基因序列构建的系统发育树有很强的对应关系。对巴斯克湖土壤直接DNA提取物的16S rRNA基因序列进行焦磷酸测序,主要回收了变形菌门(60%)、厚壁菌门(11%)和未分类细菌(27%)。如果能够污染航天器,那么能够在火星极端化学条件下生长的微生物对于前瞻性行星保护来说是一个特别需要关注的问题。

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