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全面综合分析注意力缺陷多动障碍(ADHD)在不同脑区的因果基因预测和基因表达分析

Prediction of causal genes and gene expression analysis of attention-deficit hyperactivity disorder in the different brain region, a comprehensive integrative analysis of ADHD.

机构信息

Bio-X Institutes, Key Laboratory for the Genetics of Developmental and Neuropsychiatric Disorders (Ministry of Education), Collaborative Innovation Center for Brain Science, Shanghai Jiao Tong University, Shanghai, 200030, China.

The Affiliated Hospital of Qingdao University, The Biomedical Sciences Institute of Qingdao University (Qingdao Branch of SJTU Bio-X Institutes), Qingdao University, Qingdao, 266003, China.

出版信息

Behav Brain Res. 2019 May 17;364:183-192. doi: 10.1016/j.bbr.2019.02.010. Epub 2019 Feb 6.

Abstract

Recent genome-wide association study (GWAS) identified 12 independent loci for Attention-deficit hyperactivity disorder (ADHD). However, the causal genes expression and pathways of ADHD is still vague. We integrated GWAS, eQTL and genes expression data to find the causal genes, genes expression, and genes prioritization in the different brain tissues and whole blood cells. Overall 47 genes were prioritized, the most promising genes were LSG1, HYAL3, PIDD, PNPLA2, BLOC1S2, PLK1S1, CALN1, KAT2B, CTNNB1 and WDR11. Whereas, the CALN1, KAT2B, and WDR11 were previously associated with schizophrenia (SZ), bipolar (BP) and drug abuse. Gene ontology analysis shows that the glutamate receptor signaling pathway (P = 8.009E-07, with false discovery rate (FDR) < 5%), GRIK5 sub network (P = 2.887E-06, FDR < 5%), abnormal gait (P = 3.657E-06, FDR < 5%), REACTOME_SIGNALING_BY_ERBB2 (P = 5.161E-06, FDR < 5%), and abnormal nervous system physiology (P = 5.239E-06, FDR < 5%) were associated with ADHD. These causal genes were highly expressed in Fetal Astrocytes, Neurons, and Microglia/Macrophage. This study illustrates the comprehensive GWAS integrative approach of ADHD. However, further genetic and functional studies are required to validate the role of these genes in the etiology of ADHD, which should provide novel insights into the understanding of this disease.

摘要

最近的全基因组关联研究(GWAS)确定了 12 个独立的注意力缺陷多动障碍(ADHD)基因位点。然而,ADHD 的致病基因表达和途径仍然不清楚。我们整合了 GWAS、eQTL 和基因表达数据,以在不同的脑组织和全血细胞中寻找因果基因、基因表达和基因优先级。总共优先考虑了 47 个基因,最有前途的基因是 LSG1、HYAL3、PIDD、PNPLA2、BLOC1S2、PLK1S1、CALN1、KAT2B、CTNNB1 和 WDR11。而 CALN1、KAT2B 和 WDR11 先前与精神分裂症(SZ)、双相情感障碍(BP)和药物滥用有关。基因本体论分析表明,谷氨酸受体信号通路(P=8.009E-07,假发现率(FDR)<5%)、GRIK5 子网络(P=2.887E-06,FDR<5%)、异常步态(P=3.657E-06,FDR<5%)、REACTOME_SIGNALING_BY_ERBB2(P=5.161E-06,FDR<5%)和异常神经系统生理学(P=5.239E-06,FDR<5%)与 ADHD 相关。这些因果基因在胎儿星形胶质细胞、神经元和小胶质细胞/巨噬细胞中高度表达。本研究说明了 ADHD 的综合 GWAS 综合方法。然而,需要进一步的遗传和功能研究来验证这些基因在 ADHD 发病机制中的作用,这应该为理解这种疾病提供新的见解。

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