Interdisciplinary Center for Scientific Computing, Heidelberg University, Mathematikon, Heidelberg, Germany; Heidelberg Institute for Theoretical Studies, Heidelberg, Germany.
Interdisciplinary Center for Scientific Computing, Heidelberg University, Mathematikon, Heidelberg, Germany.
Biophys J. 2019 Mar 5;116(5):831-835. doi: 10.1016/j.bpj.2019.01.023. Epub 2019 Jan 30.
Arrhythmogenic right ventricular cardiomyopathy (ARVC) is a familial heart disease linked to mutations in several desmosomal proteins, but the specific effects of these mutations on the molecular level are poorly understood. Among the many documented ARVC-related genetic variants, a striking hotspot of nine mutations has been identified in the plakin domain of desmoplakin. This hotspot can be found at the meeting point of three different subdomains of desmoplakin: two spectrin repeats and a Src homology 3 domain. We set out to understand the effect of these mutations. We determine, using molecular dynamics simulations, how these mutations affect the mechanics of this interface, performing two different classes of simulations. First, we sample the dynamics of the plakin domain, in particular the tendency of the interdomain hinge to buckle, and then we apply an external force onto the constructs and determine the force necessary to break them. We find that surface-exposed mutations are not affecting the dynamics to a very large degree but that most buried mutations make the junction more flexible and decrease the rupture forces observed. Our data suggest that buried ARVC mutations destabilize desmoplakin and thereby impair desmosome integrity under tension.
致心律失常性右室心肌病 (ARVC) 是一种与几种桥粒蛋白突变相关的家族性心脏病,但这些突变在分子水平上的具体影响仍知之甚少。在许多已记录的 ARVC 相关遗传变异中,在桥粒蛋白 plakinin 结构域中发现了九个突变的显著热点。该热点位于 plakinin 的三个不同亚结构域的交汇点:两个 spectrin 重复和一个 Src 同源 3 结构域。我们着手了解这些突变的影响。我们使用分子动力学模拟来确定这些突变如何影响该界面的力学特性,为此我们进行了两类不同的模拟。首先,我们对 plakinin 结构域的动力学进行采样,特别是对两个结构域间铰链弯曲的趋势进行采样,然后我们对构建体施加外力,并确定打破它们所需的力。我们发现,暴露于表面的突变并没有在很大程度上影响动力学,但大多数埋藏的突变使连接更具柔韧性,并降低了观察到的断裂力。我们的数据表明,埋藏的 ARVC 突变使 plakinin 不稳定,从而在张力下损害桥粒完整性。